Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS52Q8N1B4 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS52Q8N1B4 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VPS52Q8N1B4 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
VPS52Q8N1B4 REXO1L9P-201ENST00000604264 2108 ntBASIC18.8■□□□□ 0.6
VPS52Q8N1B4 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.8■□□□□ 0.6
VPS52Q8N1B4 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.8■□□□□ 0.6
VPS52Q8N1B4 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VPS52Q8N1B4 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.8■□□□□ 0.6
VPS52Q8N1B4 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
VPS52Q8N1B4 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
VPS52Q8N1B4 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VPS52Q8N1B4 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VPS52Q8N1B4 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
VPS52Q8N1B4 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS52Q8N1B4 AL353593.2-201ENST00000602529 1483 ntBASIC18.8■□□□□ 0.6
VPS52Q8N1B4 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS52Q8N1B4 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
VPS52Q8N1B4 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VPS52Q8N1B4 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.8■□□□□ 0.6
VPS52Q8N1B4 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.8■□□□□ 0.6
VPS52Q8N1B4 PMS2P2-201ENST00000425039 1128 ntBASIC18.8■□□□□ 0.6
VPS52Q8N1B4 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.8■□□□□ 0.6
VPS52Q8N1B4 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.8■□□□□ 0.6
VPS52Q8N1B4 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.8■□□□□ 0.6
VPS52Q8N1B4 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.8■□□□□ 0.6
VPS52Q8N1B4 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS52Q8N1B4 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.8■□□□□ 0.6
VPS52Q8N1B4 AC004706.3-202ENST00000621574 984 ntBASIC18.8■□□□□ 0.6
VPS52Q8N1B4 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.8■□□□□ 0.6
VPS52Q8N1B4 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.8■□□□□ 0.6
VPS52Q8N1B4 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
VPS52Q8N1B4 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VPS52Q8N1B4 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.8■□□□□ 0.6
VPS52Q8N1B4 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS52Q8N1B4 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.8■□□□□ 0.6
VPS52Q8N1B4 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.8■□□□□ 0.6
VPS52Q8N1B4 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.8■□□□□ 0.6
VPS52Q8N1B4 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.8■□□□□ 0.6
VPS52Q8N1B4 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.8■□□□□ 0.6
VPS52Q8N1B4 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.8■□□□□ 0.6
VPS52Q8N1B4 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
VPS52Q8N1B4 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS52Q8N1B4 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VPS52Q8N1B4 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.79■□□□□ 0.6
VPS52Q8N1B4 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VPS52Q8N1B4 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VPS52Q8N1B4 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
VPS52Q8N1B4 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
VPS52Q8N1B4 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.79■□□□□ 0.6
VPS52Q8N1B4 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VPS52Q8N1B4 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VPS52Q8N1B4 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.79■□□□□ 0.6
VPS52Q8N1B4 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.79■□□□□ 0.6
VPS52Q8N1B4 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VPS52Q8N1B4 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
VPS52Q8N1B4 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.79■□□□□ 0.6
VPS52Q8N1B4 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.79■□□□□ 0.6
VPS52Q8N1B4 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VPS52Q8N1B4 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18.79■□□□□ 0.6
VPS52Q8N1B4 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.79■□□□□ 0.6
VPS52Q8N1B4 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.79■□□□□ 0.6
VPS52Q8N1B4 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.79■□□□□ 0.6
VPS52Q8N1B4 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
VPS52Q8N1B4 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VPS52Q8N1B4 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
VPS52Q8N1B4 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VPS52Q8N1B4 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VPS52Q8N1B4 AC006504.4-201ENST00000592118 1568 ntBASIC18.79■□□□□ 0.6
VPS52Q8N1B4 AL049757.1-201ENST00000616842 1596 ntBASIC18.79■□□□□ 0.6
VPS52Q8N1B4 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VPS52Q8N1B4 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VPS52Q8N1B4 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.79■□□□□ 0.6
VPS52Q8N1B4 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
VPS52Q8N1B4 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
VPS52Q8N1B4 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
VPS52Q8N1B4 AC138028.4-201ENST00000564984 1845 ntBASIC18.79■□□□□ 0.6
VPS52Q8N1B4 AC132938.5-201ENST00000624980 1813 ntBASIC18.79■□□□□ 0.6
VPS52Q8N1B4 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VPS52Q8N1B4 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
VPS52Q8N1B4 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VPS52Q8N1B4 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
VPS52Q8N1B4 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VPS52Q8N1B4 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.78■□□□□ 0.6
VPS52Q8N1B4 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VPS52Q8N1B4 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
VPS52Q8N1B4 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VPS52Q8N1B4 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.78■□□□□ 0.6
VPS52Q8N1B4 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.78■□□□□ 0.6
VPS52Q8N1B4 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
VPS52Q8N1B4 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VPS52Q8N1B4 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VPS52Q8N1B4 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VPS52Q8N1B4 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.78■□□□□ 0.6
VPS52Q8N1B4 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
VPS52Q8N1B4 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC18.78■□□□□ 0.6
VPS52Q8N1B4 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.78■□□□□ 0.6
VPS52Q8N1B4 ELK2BP-201ENST00000415014 1224 ntBASIC18.78■□□□□ 0.6
VPS52Q8N1B4 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.78■□□□□ 0.6
VPS52Q8N1B4 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms