Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 NKG7-205ENST00000600427 520 ntTSL 3 BASIC21.49■■□□□ 1.03
COL23A1Q86Y22 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
COL23A1Q86Y22 AC008738.7-201ENST00000609744 511 ntBASIC21.49■■□□□ 1.03
COL23A1Q86Y22 AC018529.1-201ENST00000613063 361 ntBASIC21.49■■□□□ 1.03
COL23A1Q86Y22 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
COL23A1Q86Y22 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL23A1Q86Y22 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
COL23A1Q86Y22 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL23A1Q86Y22 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL23A1Q86Y22 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC21.48■■□□□ 1.03
COL23A1Q86Y22 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC21.48■■□□□ 1.03
COL23A1Q86Y22 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL23A1Q86Y22 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
COL23A1Q86Y22 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
COL23A1Q86Y22 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
COL23A1Q86Y22 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
COL23A1Q86Y22 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC21.48■■□□□ 1.03
COL23A1Q86Y22 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC21.48■■□□□ 1.03
COL23A1Q86Y22 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC21.48■■□□□ 1.03
COL23A1Q86Y22 AC007541.1-201ENST00000570282 1469 ntBASIC21.48■■□□□ 1.03
COL23A1Q86Y22 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
COL23A1Q86Y22 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC21.48■■□□□ 1.03
COL23A1Q86Y22 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
COL23A1Q86Y22 AC079776.1-201ENST00000401540 1152 ntBASIC21.48■■□□□ 1.03
COL23A1Q86Y22 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL23A1Q86Y22 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC21.48■■□□□ 1.03
COL23A1Q86Y22 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC21.48■■□□□ 1.03
COL23A1Q86Y22 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC21.48■■□□□ 1.03
COL23A1Q86Y22 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC21.48■■□□□ 1.03
COL23A1Q86Y22 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL23A1Q86Y22 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC21.48■■□□□ 1.03
COL23A1Q86Y22 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL23A1Q86Y22 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
COL23A1Q86Y22 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC21.48■■□□□ 1.03
COL23A1Q86Y22 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC21.48■■□□□ 1.03
COL23A1Q86Y22 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC21.48■■□□□ 1.03
COL23A1Q86Y22 AL132655.2-201ENST00000596276 594 ntBASIC21.48■■□□□ 1.03
COL23A1Q86Y22 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL23A1Q86Y22 REXO1L11P-201ENST00000620964 1927 ntBASIC21.48■■□□□ 1.03
COL23A1Q86Y22 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL23A1Q86Y22 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.48■■□□□ 1.03
COL23A1Q86Y22 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL23A1Q86Y22 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL23A1Q86Y22 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
COL23A1Q86Y22 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC21.48■■□□□ 1.03
COL23A1Q86Y22 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL23A1Q86Y22 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC21.48■■□□□ 1.03
COL23A1Q86Y22 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC21.48■■□□□ 1.03
COL23A1Q86Y22 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
COL23A1Q86Y22 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
COL23A1Q86Y22 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
COL23A1Q86Y22 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
COL23A1Q86Y22 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
COL23A1Q86Y22 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
COL23A1Q86Y22 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
COL23A1Q86Y22 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
COL23A1Q86Y22 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
COL23A1Q86Y22 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
COL23A1Q86Y22 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
COL23A1Q86Y22 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
COL23A1Q86Y22 MIR1909-201ENST00000411312 80 ntBASIC21.47■■□□□ 1.03
COL23A1Q86Y22 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
COL23A1Q86Y22 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
COL23A1Q86Y22 SATB1-217ENST00000493952 626 ntTSL 3 BASIC21.47■■□□□ 1.03
COL23A1Q86Y22 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC21.47■■□□□ 1.03
COL23A1Q86Y22 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
COL23A1Q86Y22 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC21.47■■□□□ 1.03
COL23A1Q86Y22 ARL16-202ENST00000570561 768 ntTSL 2 BASIC21.47■■□□□ 1.03
COL23A1Q86Y22 AC017083.2-201ENST00000608069 979 ntBASIC21.47■■□□□ 1.03
COL23A1Q86Y22 AC003101.2-201ENST00000612557 442 ntBASIC21.47■■□□□ 1.03
COL23A1Q86Y22 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
COL23A1Q86Y22 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
COL23A1Q86Y22 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
COL23A1Q86Y22 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
COL23A1Q86Y22 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC21.47■■□□□ 1.03
COL23A1Q86Y22 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
COL23A1Q86Y22 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC21.46■■□□□ 1.03
COL23A1Q86Y22 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL23A1Q86Y22 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
COL23A1Q86Y22 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
COL23A1Q86Y22 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.46■■□□□ 1.03
COL23A1Q86Y22 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC21.46■■□□□ 1.03
COL23A1Q86Y22 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC21.46■■□□□ 1.03
COL23A1Q86Y22 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL23A1Q86Y22 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL23A1Q86Y22 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL23A1Q86Y22 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
COL23A1Q86Y22 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
COL23A1Q86Y22 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC21.46■■□□□ 1.03
COL23A1Q86Y22 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC21.46■■□□□ 1.03
COL23A1Q86Y22 INE1-201ENST00000456273 945 ntBASIC21.46■■□□□ 1.03
COL23A1Q86Y22 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
COL23A1Q86Y22 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
COL23A1Q86Y22 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
COL23A1Q86Y22 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC21.46■■□□□ 1.03
COL23A1Q86Y22 CROCCP3-202ENST00000420820 1947 ntBASIC21.46■■□□□ 1.03
COL23A1Q86Y22 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL23A1Q86Y22 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC21.46■■□□□ 1.03
COL23A1Q86Y22 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL23A1Q86Y22 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms