Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.04■□□□□ 0.16
VRK2Q86Y07 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
VRK2Q86Y07 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
VRK2Q86Y07 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.04■□□□□ 0.16
VRK2Q86Y07 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.04■□□□□ 0.16
VRK2Q86Y07 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
VRK2Q86Y07 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
VRK2Q86Y07 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VRK2Q86Y07 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VRK2Q86Y07 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
VRK2Q86Y07 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VRK2Q86Y07 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VRK2Q86Y07 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VRK2Q86Y07 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VRK2Q86Y07 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
VRK2Q86Y07 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VRK2Q86Y07 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
VRK2Q86Y07 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
VRK2Q86Y07 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
VRK2Q86Y07 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
VRK2Q86Y07 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VRK2Q86Y07 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VRK2Q86Y07 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VRK2Q86Y07 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VRK2Q86Y07 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.03■□□□□ 0.16
VRK2Q86Y07 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.03■□□□□ 0.16
VRK2Q86Y07 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
VRK2Q86Y07 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VRK2Q86Y07 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.03■□□□□ 0.16
VRK2Q86Y07 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
VRK2Q86Y07 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.03■□□□□ 0.16
VRK2Q86Y07 DRAXINP1-201ENST00000437611 948 ntBASIC16.03■□□□□ 0.16
VRK2Q86Y07 LINC00265-3P-201ENST00000447588 903 ntBASIC16.03■□□□□ 0.16
VRK2Q86Y07 MINOS1P3-201ENST00000457048 203 ntBASIC16.03■□□□□ 0.16
VRK2Q86Y07 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
VRK2Q86Y07 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.03■□□□□ 0.16
VRK2Q86Y07 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
VRK2Q86Y07 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.03■□□□□ 0.16
VRK2Q86Y07 Z69720.1-201ENST00000601483 472 ntBASIC16.03■□□□□ 0.16
VRK2Q86Y07 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
VRK2Q86Y07 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
VRK2Q86Y07 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
VRK2Q86Y07 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.03■□□□□ 0.16
VRK2Q86Y07 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.03■□□□□ 0.16
VRK2Q86Y07 AC132938.5-201ENST00000624980 1813 ntBASIC16.03■□□□□ 0.16
VRK2Q86Y07 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.03■□□□□ 0.16
VRK2Q86Y07 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.03■□□□□ 0.16
VRK2Q86Y07 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VRK2Q86Y07 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
VRK2Q86Y07 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
VRK2Q86Y07 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
VRK2Q86Y07 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.02■□□□□ 0.16
VRK2Q86Y07 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
VRK2Q86Y07 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
VRK2Q86Y07 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
VRK2Q86Y07 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
VRK2Q86Y07 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
VRK2Q86Y07 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
VRK2Q86Y07 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
VRK2Q86Y07 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
VRK2Q86Y07 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.02■□□□□ 0.16
VRK2Q86Y07 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
VRK2Q86Y07 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
VRK2Q86Y07 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.02■□□□□ 0.16
VRK2Q86Y07 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
VRK2Q86Y07 AC009336.1-201ENST00000608941 1553 ntBASIC16.02■□□□□ 0.16
VRK2Q86Y07 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
VRK2Q86Y07 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
VRK2Q86Y07 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
VRK2Q86Y07 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
VRK2Q86Y07 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
VRK2Q86Y07 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.02■□□□□ 0.16
VRK2Q86Y07 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.02■□□□□ 0.16
VRK2Q86Y07 KRT17P6-201ENST00000453795 1220 ntBASIC16.02■□□□□ 0.16
VRK2Q86Y07 AC096582.2-201ENST00000510860 516 ntBASIC16.02■□□□□ 0.16
VRK2Q86Y07 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.02■□□□□ 0.16
VRK2Q86Y07 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.02■□□□□ 0.16
VRK2Q86Y07 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
VRK2Q86Y07 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.02■□□□□ 0.16
VRK2Q86Y07 AD001527.2-201ENST00000622994 785 ntBASIC16.02■□□□□ 0.16
VRK2Q86Y07 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
VRK2Q86Y07 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
VRK2Q86Y07 NSUN5P1-202ENST00000421140 1535 ntBASIC16.02■□□□□ 0.15
VRK2Q86Y07 NSUN5P2-203ENST00000457352 1529 ntBASIC16.02■□□□□ 0.15
VRK2Q86Y07 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
VRK2Q86Y07 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
VRK2Q86Y07 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.02■□□□□ 0.15
VRK2Q86Y07 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
VRK2Q86Y07 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
VRK2Q86Y07 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
VRK2Q86Y07 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
VRK2Q86Y07 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
VRK2Q86Y07 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
VRK2Q86Y07 AL135999.2-201ENST00000622438 1686 ntBASIC16.02■□□□□ 0.15
VRK2Q86Y07 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
VRK2Q86Y07 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.01■□□□□ 0.15
VRK2Q86Y07 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
VRK2Q86Y07 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
VRK2Q86Y07 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
VRK2Q86Y07 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms