Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LRRC28Q86X40 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRRC28Q86X40 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC15.46■□□□□ 0.07
LRRC28Q86X40 AC079602.3-201ENST00000623931 403 ntBASIC15.46■□□□□ 0.07
LRRC28Q86X40 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRRC28Q86X40 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LRRC28Q86X40 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRRC28Q86X40 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.46■□□□□ 0.07
LRRC28Q86X40 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRRC28Q86X40 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.46■□□□□ 0.07
LRRC28Q86X40 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LRRC28Q86X40 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRRC28Q86X40 AC026691.1-201ENST00000602502 2017 ntBASIC15.46■□□□□ 0.07
LRRC28Q86X40 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRRC28Q86X40 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
LRRC28Q86X40 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.06
LRRC28Q86X40 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
LRRC28Q86X40 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
LRRC28Q86X40 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
LRRC28Q86X40 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
LRRC28Q86X40 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
LRRC28Q86X40 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
LRRC28Q86X40 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRRC28Q86X40 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LRRC28Q86X40 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRRC28Q86X40 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRRC28Q86X40 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRRC28Q86X40 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRRC28Q86X40 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LRRC28Q86X40 AC005332.1-201ENST00000577698 1310 ntBASIC15.45■□□□□ 0.06
LRRC28Q86X40 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LRRC28Q86X40 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRRC28Q86X40 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.45■□□□□ 0.06
LRRC28Q86X40 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRRC28Q86X40 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.45■□□□□ 0.06
LRRC28Q86X40 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
LRRC28Q86X40 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC15.45■□□□□ 0.06
LRRC28Q86X40 AL391807.1-203ENST00000604392 2365 ntBASIC15.45■□□□□ 0.06
LRRC28Q86X40 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRRC28Q86X40 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRRC28Q86X40 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRRC28Q86X40 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRRC28Q86X40 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LRRC28Q86X40 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LRRC28Q86X40 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.45■□□□□ 0.06
LRRC28Q86X40 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC15.45■□□□□ 0.06
LRRC28Q86X40 AL136038.4-201ENST00000603606 1261 ntBASIC15.45■□□□□ 0.06
LRRC28Q86X40 AC116407.4-201ENST00000623319 1061 ntBASIC15.45■□□□□ 0.06
LRRC28Q86X40 CLN6-214ENST00000636314 442 ntTSL 3 BASIC15.45■□□□□ 0.06
LRRC28Q86X40 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRRC28Q86X40 LINC02199-201ENST00000506655 2702 ntBASIC15.45■□□□□ 0.06
LRRC28Q86X40 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRRC28Q86X40 AL024508.2-201ENST00000607749 1894 ntBASIC15.45■□□□□ 0.06
LRRC28Q86X40 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.45■□□□□ 0.06
LRRC28Q86X40 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRRC28Q86X40 AL596257.1-201ENST00000641463 2694 ntBASIC15.45■□□□□ 0.06
LRRC28Q86X40 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRRC28Q86X40 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LRRC28Q86X40 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LRRC28Q86X40 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LRRC28Q86X40 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.44■□□□□ 0.06
LRRC28Q86X40 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRC28Q86X40 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRC28Q86X40 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
LRRC28Q86X40 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRC28Q86X40 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRC28Q86X40 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.44■□□□□ 0.06
LRRC28Q86X40 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.44■□□□□ 0.06
LRRC28Q86X40 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRC28Q86X40 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
LRRC28Q86X40 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.44■□□□□ 0.06
LRRC28Q86X40 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LRRC28Q86X40 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
LRRC28Q86X40 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRC28Q86X40 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRC28Q86X40 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.44■□□□□ 0.06
LRRC28Q86X40 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC15.44■□□□□ 0.06
LRRC28Q86X40 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LRRC28Q86X40 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LRRC28Q86X40 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRC28Q86X40 PVRIG2P-201ENST00000435460 978 ntBASIC15.44■□□□□ 0.06
LRRC28Q86X40 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRC28Q86X40 PTK2-216ENST00000519881 863 ntTSL 3 BASIC15.44■□□□□ 0.06
LRRC28Q86X40 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC15.44■□□□□ 0.06
LRRC28Q86X40 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRC28Q86X40 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC15.44■□□□□ 0.06
LRRC28Q86X40 AC116407.2-201ENST00000613639 860 ntBASIC15.44■□□□□ 0.06
LRRC28Q86X40 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LRRC28Q86X40 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LRRC28Q86X40 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRC28Q86X40 IER3-202ENST00000376377 1350 ntBASIC15.44■□□□□ 0.06
LRRC28Q86X40 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRC28Q86X40 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC15.44■□□□□ 0.06
LRRC28Q86X40 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRC28Q86X40 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRC28Q86X40 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
LRRC28Q86X40 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRC28Q86X40 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.44■□□□□ 0.06
LRRC28Q86X40 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRC28Q86X40 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms