Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
VPS13BQ7Z7G8 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
VPS13BQ7Z7G8 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC10.58□□□□□ -0.72
VPS13BQ7Z7G8 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC10.57□□□□□ -0.72
VPS13BQ7Z7G8 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
VPS13BQ7Z7G8 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
VPS13BQ7Z7G8 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC10.57□□□□□ -0.72
VPS13BQ7Z7G8 MMP17-203ENST00000535004 719 ntTSL 3 BASIC10.57□□□□□ -0.72
VPS13BQ7Z7G8 NOP2-211ENST00000540228 668 ntTSL 2 BASIC10.57□□□□□ -0.72
VPS13BQ7Z7G8 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC10.57□□□□□ -0.72
VPS13BQ7Z7G8 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
VPS13BQ7Z7G8 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
VPS13BQ7Z7G8 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
VPS13BQ7Z7G8 HARS-203ENST00000431330 1774 ntTSL 2 BASIC10.57□□□□□ -0.72
VPS13BQ7Z7G8 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
VPS13BQ7Z7G8 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
VPS13BQ7Z7G8 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC10.57□□□□□ -0.72
VPS13BQ7Z7G8 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC10.57□□□□□ -0.72
VPS13BQ7Z7G8 AC005237.2-201ENST00000434368 219 ntBASIC10.57□□□□□ -0.72
VPS13BQ7Z7G8 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
VPS13BQ7Z7G8 RN7SL692P-201ENST00000464677 288 ntBASIC10.57□□□□□ -0.72
VPS13BQ7Z7G8 AC002558.1-201ENST00000488906 803 ntBASIC10.57□□□□□ -0.72
VPS13BQ7Z7G8 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC10.57□□□□□ -0.72
VPS13BQ7Z7G8 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC10.57□□□□□ -0.72
VPS13BQ7Z7G8 AC107918.2-201ENST00000530817 355 ntBASIC10.57□□□□□ -0.72
VPS13BQ7Z7G8 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
VPS13BQ7Z7G8 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC10.57□□□□□ -0.72
VPS13BQ7Z7G8 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC10.57□□□□□ -0.72
VPS13BQ7Z7G8 AP000842.3-202ENST00000569238 1080 ntBASIC10.57□□□□□ -0.72
VPS13BQ7Z7G8 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC10.57□□□□□ -0.72
VPS13BQ7Z7G8 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC10.57□□□□□ -0.72
VPS13BQ7Z7G8 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
VPS13BQ7Z7G8 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC10.57□□□□□ -0.72
VPS13BQ7Z7G8 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
VPS13BQ7Z7G8 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
VPS13BQ7Z7G8 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
VPS13BQ7Z7G8 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
VPS13BQ7Z7G8 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
VPS13BQ7Z7G8 CXCL1P1-201ENST00000502804 216 ntBASIC10.57□□□□□ -0.72
VPS13BQ7Z7G8 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC10.57□□□□□ -0.72
VPS13BQ7Z7G8 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
VPS13BQ7Z7G8 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
VPS13BQ7Z7G8 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
VPS13BQ7Z7G8 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
VPS13BQ7Z7G8 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
VPS13BQ7Z7G8 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
VPS13BQ7Z7G8 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
VPS13BQ7Z7G8 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
VPS13BQ7Z7G8 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
VPS13BQ7Z7G8 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC10.56□□□□□ -0.72
VPS13BQ7Z7G8 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC10.56□□□□□ -0.72
VPS13BQ7Z7G8 AC009407.1-201ENST00000568958 598 ntBASIC10.56□□□□□ -0.72
VPS13BQ7Z7G8 GGTLC5P-201ENST00000617623 998 ntBASIC10.56□□□□□ -0.72
VPS13BQ7Z7G8 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
VPS13BQ7Z7G8 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
VPS13BQ7Z7G8 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC10.56□□□□□ -0.72
VPS13BQ7Z7G8 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
VPS13BQ7Z7G8 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
VPS13BQ7Z7G8 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
VPS13BQ7Z7G8 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC10.56□□□□□ -0.72
VPS13BQ7Z7G8 SPDYE7P-202ENST00000420373 878 ntBASIC10.56□□□□□ -0.72
VPS13BQ7Z7G8 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC10.56□□□□□ -0.72
VPS13BQ7Z7G8 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC10.56□□□□□ -0.72
VPS13BQ7Z7G8 Six3os1_5.1-201ENST00000611000 271 ntBASIC10.56□□□□□ -0.72
VPS13BQ7Z7G8 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC10.56□□□□□ -0.72
VPS13BQ7Z7G8 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC10.56□□□□□ -0.72
VPS13BQ7Z7G8 CD276-203ENST00000537340 2439 ntTSL 2 BASIC10.56□□□□□ -0.72
VPS13BQ7Z7G8 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
VPS13BQ7Z7G8 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
VPS13BQ7Z7G8 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
VPS13BQ7Z7G8 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC10.56□□□□□ -0.72
VPS13BQ7Z7G8 RN7SL589P-201ENST00000481268 310 ntBASIC10.56□□□□□ -0.72
VPS13BQ7Z7G8 AC079140.1-201ENST00000508039 487 ntBASIC10.56□□□□□ -0.72
VPS13BQ7Z7G8 AC026120.1-201ENST00000611536 926 ntBASIC10.56□□□□□ -0.72
VPS13BQ7Z7G8 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC10.56□□□□□ -0.72
VPS13BQ7Z7G8 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
VPS13BQ7Z7G8 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
VPS13BQ7Z7G8 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
VPS13BQ7Z7G8 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
VPS13BQ7Z7G8 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC10.56□□□□□ -0.72
VPS13BQ7Z7G8 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
VPS13BQ7Z7G8 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
VPS13BQ7Z7G8 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
VPS13BQ7Z7G8 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC10.56□□□□□ -0.72
VPS13BQ7Z7G8 AC090164.3-201ENST00000610780 2143 ntBASIC10.56□□□□□ -0.72
VPS13BQ7Z7G8 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC10.56□□□□□ -0.72
VPS13BQ7Z7G8 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC10.55□□□□□ -0.72
VPS13BQ7Z7G8 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
VPS13BQ7Z7G8 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
VPS13BQ7Z7G8 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
VPS13BQ7Z7G8 ACTG1P4-201ENST00000425123 1122 ntBASIC10.55□□□□□ -0.72
VPS13BQ7Z7G8 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
VPS13BQ7Z7G8 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
VPS13BQ7Z7G8 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC10.55□□□□□ -0.72
VPS13BQ7Z7G8 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC10.55□□□□□ -0.72
VPS13BQ7Z7G8 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
VPS13BQ7Z7G8 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
VPS13BQ7Z7G8 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC10.55□□□□□ -0.72
VPS13BQ7Z7G8 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC10.55□□□□□ -0.72
VPS13BQ7Z7G8 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC10.55□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms