Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.8■□□□□ 0.12
NIPAL3Q6P499 AP000867.3-201ENST00000524675 377 ntBASIC15.8■□□□□ 0.12
NIPAL3Q6P499 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NIPAL3Q6P499 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC15.8■□□□□ 0.12
NIPAL3Q6P499 AC092329.2-201ENST00000598402 547 ntBASIC15.8■□□□□ 0.12
NIPAL3Q6P499 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
NIPAL3Q6P499 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
NIPAL3Q6P499 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NIPAL3Q6P499 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
NIPAL3Q6P499 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.8■□□□□ 0.12
NIPAL3Q6P499 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC15.8■□□□□ 0.12
NIPAL3Q6P499 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NIPAL3Q6P499 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
NIPAL3Q6P499 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NIPAL3Q6P499 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NIPAL3Q6P499 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.8■□□□□ 0.12
NIPAL3Q6P499 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
NIPAL3Q6P499 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
NIPAL3Q6P499 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NIPAL3Q6P499 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NIPAL3Q6P499 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
NIPAL3Q6P499 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
NIPAL3Q6P499 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NIPAL3Q6P499 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NIPAL3Q6P499 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.79■□□□□ 0.12
NIPAL3Q6P499 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
NIPAL3Q6P499 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.79■□□□□ 0.12
NIPAL3Q6P499 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NIPAL3Q6P499 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NIPAL3Q6P499 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NIPAL3Q6P499 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
NIPAL3Q6P499 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NIPAL3Q6P499 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.79■□□□□ 0.12
NIPAL3Q6P499 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NIPAL3Q6P499 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NIPAL3Q6P499 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NIPAL3Q6P499 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
NIPAL3Q6P499 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NIPAL3Q6P499 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NIPAL3Q6P499 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
NIPAL3Q6P499 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NIPAL3Q6P499 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
NIPAL3Q6P499 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
NIPAL3Q6P499 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
NIPAL3Q6P499 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC15.79■□□□□ 0.12
NIPAL3Q6P499 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC15.79■□□□□ 0.12
NIPAL3Q6P499 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NIPAL3Q6P499 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
NIPAL3Q6P499 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC15.79■□□□□ 0.12
NIPAL3Q6P499 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC15.79■□□□□ 0.12
NIPAL3Q6P499 MIR3180-1-201ENST00000580374 94 ntBASIC15.79■□□□□ 0.12
NIPAL3Q6P499 MIR3180-3-201ENST00000584616 94 ntBASIC15.79■□□□□ 0.12
NIPAL3Q6P499 AC005336.2-201ENST00000593183 939 ntBASIC15.79■□□□□ 0.12
NIPAL3Q6P499 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.79■□□□□ 0.12
NIPAL3Q6P499 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
NIPAL3Q6P499 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC15.79■□□□□ 0.12
NIPAL3Q6P499 AL353801.3-201ENST00000609898 542 ntBASIC15.79■□□□□ 0.12
NIPAL3Q6P499 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC15.79■□□□□ 0.12
NIPAL3Q6P499 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
NIPAL3Q6P499 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NIPAL3Q6P499 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NIPAL3Q6P499 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
NIPAL3Q6P499 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.79■□□□□ 0.12
NIPAL3Q6P499 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
NIPAL3Q6P499 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NIPAL3Q6P499 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
NIPAL3Q6P499 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NIPAL3Q6P499 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NIPAL3Q6P499 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NIPAL3Q6P499 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NIPAL3Q6P499 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
NIPAL3Q6P499 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NIPAL3Q6P499 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
NIPAL3Q6P499 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NIPAL3Q6P499 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NIPAL3Q6P499 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC15.78■□□□□ 0.12
NIPAL3Q6P499 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NIPAL3Q6P499 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC15.78■□□□□ 0.12
NIPAL3Q6P499 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
NIPAL3Q6P499 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC15.78■□□□□ 0.12
NIPAL3Q6P499 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NIPAL3Q6P499 AC074051.2-201ENST00000565115 352 ntBASIC15.78■□□□□ 0.12
NIPAL3Q6P499 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.78■□□□□ 0.12
NIPAL3Q6P499 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC15.78■□□□□ 0.12
NIPAL3Q6P499 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
NIPAL3Q6P499 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NIPAL3Q6P499 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NIPAL3Q6P499 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NIPAL3Q6P499 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NIPAL3Q6P499 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NIPAL3Q6P499 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NIPAL3Q6P499 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.78■□□□□ 0.12
NIPAL3Q6P499 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC15.78■□□□□ 0.12
NIPAL3Q6P499 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.78■□□□□ 0.12
NIPAL3Q6P499 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
NIPAL3Q6P499 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
NIPAL3Q6P499 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
NIPAL3Q6P499 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NIPAL3Q6P499 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
NIPAL3Q6P499 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms