Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
ATP2B3Q16720 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
ATP2B3Q16720 METTL26-205ENST00000397666 726 ntTSL 2 BASIC21.2■□□□□ 0.98
ATP2B3Q16720 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC21.2■□□□□ 0.98
ATP2B3Q16720 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC21.2■□□□□ 0.98
ATP2B3Q16720 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC21.2■□□□□ 0.98
ATP2B3Q16720 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC21.2■□□□□ 0.98
ATP2B3Q16720 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC21.2■□□□□ 0.98
ATP2B3Q16720 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC21.2■□□□□ 0.98
ATP2B3Q16720 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATP2B3Q16720 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
ATP2B3Q16720 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC21.2■□□□□ 0.98
ATP2B3Q16720 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATP2B3Q16720 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATP2B3Q16720 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATP2B3Q16720 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ATP2B3Q16720 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC21.2■□□□□ 0.98
ATP2B3Q16720 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ATP2B3Q16720 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATP2B3Q16720 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATP2B3Q16720 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATP2B3Q16720 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ATP2B3Q16720 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ATP2B3Q16720 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
ATP2B3Q16720 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
ATP2B3Q16720 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
ATP2B3Q16720 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ATP2B3Q16720 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC21.19■□□□□ 0.98
ATP2B3Q16720 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP2B3Q16720 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
ATP2B3Q16720 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ATP2B3Q16720 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
ATP2B3Q16720 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ATP2B3Q16720 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC21.19■□□□□ 0.98
ATP2B3Q16720 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ATP2B3Q16720 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC21.19■□□□□ 0.98
ATP2B3Q16720 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ATP2B3Q16720 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP2B3Q16720 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP2B3Q16720 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC21.19■□□□□ 0.98
ATP2B3Q16720 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC21.19■□□□□ 0.98
ATP2B3Q16720 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ATP2B3Q16720 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP2B3Q16720 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP2B3Q16720 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP2B3Q16720 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP2B3Q16720 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP2B3Q16720 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP2B3Q16720 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP2B3Q16720 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP2B3Q16720 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP2B3Q16720 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP2B3Q16720 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC21.18■□□□□ 0.98
ATP2B3Q16720 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
ATP2B3Q16720 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC21.18■□□□□ 0.98
ATP2B3Q16720 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP2B3Q16720 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
ATP2B3Q16720 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
ATP2B3Q16720 CRYGEP-201ENST00000412192 528 ntBASIC21.18■□□□□ 0.98
ATP2B3Q16720 COX10-202ENST00000429152 875 ntTSL 2 BASIC21.18■□□□□ 0.98
ATP2B3Q16720 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC21.18■□□□□ 0.98
ATP2B3Q16720 VN2R19P-201ENST00000442399 1052 ntBASIC21.18■□□□□ 0.98
ATP2B3Q16720 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC21.18■□□□□ 0.98
ATP2B3Q16720 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC21.18■□□□□ 0.98
ATP2B3Q16720 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC21.18■□□□□ 0.98
ATP2B3Q16720 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC21.18■□□□□ 0.98
ATP2B3Q16720 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC21.18■□□□□ 0.98
ATP2B3Q16720 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC21.18■□□□□ 0.98
ATP2B3Q16720 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
ATP2B3Q16720 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP2B3Q16720 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ATP2B3Q16720 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC21.18■□□□□ 0.98
ATP2B3Q16720 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP2B3Q16720 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ATP2B3Q16720 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
ATP2B3Q16720 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP2B3Q16720 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
ATP2B3Q16720 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC21.18■□□□□ 0.98
ATP2B3Q16720 AC138932.1-201ENST00000534164 6830 ntBASIC21.18■□□□□ 0.98
ATP2B3Q16720 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC21.18■□□□□ 0.98
ATP2B3Q16720 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ATP2B3Q16720 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP2B3Q16720 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC21.17■□□□□ 0.98
ATP2B3Q16720 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP2B3Q16720 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ATP2B3Q16720 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP2B3Q16720 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC21.17■□□□□ 0.98
ATP2B3Q16720 KRT18P13-201ENST00000400056 1290 ntBASIC21.17■□□□□ 0.98
ATP2B3Q16720 MRPL20P1-201ENST00000400819 433 ntBASIC21.17■□□□□ 0.98
ATP2B3Q16720 IMP4-203ENST00000409935 958 ntTSL 5 BASIC21.17■□□□□ 0.98
ATP2B3Q16720 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ATP2B3Q16720 BX842568.4-201ENST00000421222 227 ntBASIC21.17■□□□□ 0.98
ATP2B3Q16720 PRSS29P-201ENST00000440800 595 ntBASIC21.17■□□□□ 0.98
ATP2B3Q16720 KRT18P2-201ENST00000447938 1258 ntBASIC21.17■□□□□ 0.98
ATP2B3Q16720 AC092865.5-201ENST00000545435 363 ntBASIC21.17■□□□□ 0.98
ATP2B3Q16720 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP2B3Q16720 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
ATP2B3Q16720 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ATP2B3Q16720 PI4KAP1-204ENST00000612579 1703 ntBASIC21.17■□□□□ 0.98
ATP2B3Q16720 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms