Protein–RNA interactions for Protein: Q13352

ITGB3BP, Centromere protein R, humanhuman

Predicted RBP Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB3BPQ13352 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ITGB3BPQ13352 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
ITGB3BPQ13352 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ITGB3BPQ13352 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC19.42■□□□□ 0.7
ITGB3BPQ13352 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
ITGB3BPQ13352 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.42■□□□□ 0.7
ITGB3BPQ13352 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
ITGB3BPQ13352 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ITGB3BPQ13352 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ITGB3BPQ13352 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ITGB3BPQ13352 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ITGB3BPQ13352 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
ITGB3BPQ13352 AC099398.1-201ENST00000567919 2776 ntBASIC19.41■□□□□ 0.7
ITGB3BPQ13352 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC19.41■□□□□ 0.7
ITGB3BPQ13352 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ITGB3BPQ13352 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.41■□□□□ 0.7
ITGB3BPQ13352 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ITGB3BPQ13352 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC19.41■□□□□ 0.7
ITGB3BPQ13352 VN2R19P-201ENST00000442399 1052 ntBASIC19.41■□□□□ 0.7
ITGB3BPQ13352 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC19.41■□□□□ 0.7
ITGB3BPQ13352 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC19.41■□□□□ 0.7
ITGB3BPQ13352 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC19.41■□□□□ 0.7
ITGB3BPQ13352 MIR4751-201ENST00000578027 74 ntBASIC19.41■□□□□ 0.7
ITGB3BPQ13352 TCAP-202ENST00000578283 583 ntTSL 5 BASIC19.41■□□□□ 0.7
ITGB3BPQ13352 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.41■□□□□ 0.7
ITGB3BPQ13352 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ITGB3BPQ13352 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ITGB3BPQ13352 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ITGB3BPQ13352 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
ITGB3BPQ13352 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
ITGB3BPQ13352 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
ITGB3BPQ13352 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC19.41■□□□□ 0.7
ITGB3BPQ13352 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ITGB3BPQ13352 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ITGB3BPQ13352 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.41■□□□□ 0.7
ITGB3BPQ13352 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.41■□□□□ 0.7
ITGB3BPQ13352 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ITGB3BPQ13352 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.4■□□□□ 0.7
ITGB3BPQ13352 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC19.4■□□□□ 0.7
ITGB3BPQ13352 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
ITGB3BPQ13352 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.4■□□□□ 0.7
ITGB3BPQ13352 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ITGB3BPQ13352 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ITGB3BPQ13352 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ITGB3BPQ13352 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
ITGB3BPQ13352 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ITGB3BPQ13352 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
ITGB3BPQ13352 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC19.4■□□□□ 0.7
ITGB3BPQ13352 IGLL3P-201ENST00000412472 434 ntBASIC19.4■□□□□ 0.7
ITGB3BPQ13352 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
ITGB3BPQ13352 PRSS29P-201ENST00000440800 595 ntBASIC19.4■□□□□ 0.7
ITGB3BPQ13352 HCG4B-203ENST00000450128 991 ntBASIC19.4■□□□□ 0.7
ITGB3BPQ13352 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ITGB3BPQ13352 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC19.4■□□□□ 0.7
ITGB3BPQ13352 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC19.4■□□□□ 0.7
ITGB3BPQ13352 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ITGB3BPQ13352 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
ITGB3BPQ13352 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
ITGB3BPQ13352 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ITGB3BPQ13352 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.4■□□□□ 0.7
ITGB3BPQ13352 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ITGB3BPQ13352 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
ITGB3BPQ13352 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.4■□□□□ 0.7
ITGB3BPQ13352 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ITGB3BPQ13352 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ITGB3BPQ13352 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
ITGB3BPQ13352 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
ITGB3BPQ13352 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
ITGB3BPQ13352 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ITGB3BPQ13352 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
ITGB3BPQ13352 PI4KAP1-204ENST00000612579 1703 ntBASIC19.39■□□□□ 0.7
ITGB3BPQ13352 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ITGB3BPQ13352 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC19.39■□□□□ 0.7
ITGB3BPQ13352 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ITGB3BPQ13352 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ITGB3BPQ13352 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
ITGB3BPQ13352 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ITGB3BPQ13352 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
ITGB3BPQ13352 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
ITGB3BPQ13352 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ITGB3BPQ13352 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
ITGB3BPQ13352 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
ITGB3BPQ13352 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
ITGB3BPQ13352 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ITGB3BPQ13352 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ITGB3BPQ13352 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ITGB3BPQ13352 SLC25A1P3-201ENST00000395415 828 ntBASIC19.39■□□□□ 0.69
ITGB3BPQ13352 IMP4-203ENST00000409935 958 ntTSL 5 BASIC19.39■□□□□ 0.69
ITGB3BPQ13352 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC19.39■□□□□ 0.69
ITGB3BPQ13352 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC19.39■□□□□ 0.69
ITGB3BPQ13352 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.39■□□□□ 0.69
ITGB3BPQ13352 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
ITGB3BPQ13352 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.39■□□□□ 0.69
ITGB3BPQ13352 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ITGB3BPQ13352 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC19.39■□□□□ 0.69
ITGB3BPQ13352 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC19.39■□□□□ 0.69
ITGB3BPQ13352 AL138688.1-201ENST00000624851 1594 ntBASIC19.39■□□□□ 0.69
ITGB3BPQ13352 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ITGB3BPQ13352 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.39■□□□□ 0.69
ITGB3BPQ13352 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms