Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC14.86□□□□□ -0.03
ABCA4P78363 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ABCA4P78363 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ABCA4P78363 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ABCA4P78363 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ABCA4P78363 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
ABCA4P78363 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.86□□□□□ -0.03
ABCA4P78363 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.86□□□□□ -0.03
ABCA4P78363 KRT18P32-201ENST00000424695 1287 ntBASIC14.86□□□□□ -0.03
ABCA4P78363 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ABCA4P78363 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ABCA4P78363 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ABCA4P78363 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.86□□□□□ -0.03
ABCA4P78363 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ABCA4P78363 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ABCA4P78363 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ABCA4P78363 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ABCA4P78363 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ABCA4P78363 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.86□□□□□ -0.03
ABCA4P78363 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
ABCA4P78363 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.86□□□□□ -0.03
ABCA4P78363 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.86□□□□□ -0.03
ABCA4P78363 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.86□□□□□ -0.03
ABCA4P78363 PAWRP1-201ENST00000451083 565 ntBASIC14.86□□□□□ -0.03
ABCA4P78363 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.86□□□□□ -0.03
ABCA4P78363 AC069262.1-201ENST00000539058 672 ntBASIC14.86□□□□□ -0.03
ABCA4P78363 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.86□□□□□ -0.03
ABCA4P78363 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ABCA4P78363 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ABCA4P78363 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
ABCA4P78363 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ABCA4P78363 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
ABCA4P78363 AL121761.2-201ENST00000598007 1648 ntBASIC14.85□□□□□ -0.03
ABCA4P78363 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ABCA4P78363 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ABCA4P78363 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ABCA4P78363 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ABCA4P78363 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC14.85□□□□□ -0.03
ABCA4P78363 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.85□□□□□ -0.03
ABCA4P78363 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
ABCA4P78363 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.85□□□□□ -0.03
ABCA4P78363 AC015922.1-201ENST00000421102 1152 ntBASIC14.85□□□□□ -0.03
ABCA4P78363 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.85□□□□□ -0.03
ABCA4P78363 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.85□□□□□ -0.03
ABCA4P78363 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.85□□□□□ -0.03
ABCA4P78363 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.85□□□□□ -0.03
ABCA4P78363 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.85□□□□□ -0.03
ABCA4P78363 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.85□□□□□ -0.03
ABCA4P78363 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.85□□□□□ -0.03
ABCA4P78363 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.85□□□□□ -0.03
ABCA4P78363 AC116407.2-201ENST00000613639 860 ntBASIC14.85□□□□□ -0.03
ABCA4P78363 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
ABCA4P78363 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
ABCA4P78363 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
ABCA4P78363 AMT-250ENST00000637682 1823 ntTSL 5 BASIC14.85□□□□□ -0.03
ABCA4P78363 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ABCA4P78363 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
ABCA4P78363 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ABCA4P78363 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC14.85□□□□□ -0.03
ABCA4P78363 AC092919.2-201ENST00000623631 1645 ntBASIC14.85□□□□□ -0.03
ABCA4P78363 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ABCA4P78363 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
ABCA4P78363 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ABCA4P78363 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
ABCA4P78363 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
ABCA4P78363 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
ABCA4P78363 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ABCA4P78363 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC14.85□□□□□ -0.03
ABCA4P78363 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
ABCA4P78363 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ABCA4P78363 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ABCA4P78363 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC14.85□□□□□ -0.03
ABCA4P78363 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ABCA4P78363 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
ABCA4P78363 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC14.85□□□□□ -0.03
ABCA4P78363 ENSA-206ENST00000361631 725 ntTSL 2 BASIC14.85□□□□□ -0.03
ABCA4P78363 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.85□□□□□ -0.03
ABCA4P78363 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.85□□□□□ -0.03
ABCA4P78363 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ABCA4P78363 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
ABCA4P78363 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.85□□□□□ -0.03
ABCA4P78363 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ABCA4P78363 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ABCA4P78363 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.84□□□□□ -0.03
ABCA4P78363 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ABCA4P78363 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
ABCA4P78363 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ABCA4P78363 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
ABCA4P78363 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC14.84□□□□□ -0.03
ABCA4P78363 AC129492.6-201ENST00000611383 1305 ntBASIC14.84□□□□□ -0.03
ABCA4P78363 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ABCA4P78363 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ABCA4P78363 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ABCA4P78363 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
ABCA4P78363 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ABCA4P78363 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ABCA4P78363 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC14.84□□□□□ -0.03
ABCA4P78363 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ABCA4P78363 STK19B-204ENST00000512515 211 ntBASIC14.84□□□□□ -0.03
ABCA4P78363 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms