Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.05□□□□□ -0.32
HIST1H2BDP58876 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H2BDP58876 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H2BDP58876 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H2BDP58876 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H2BDP58876 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H2BDP58876 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
HIST1H2BDP58876 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H2BDP58876 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H2BDP58876 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H2BDP58876 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
HIST1H2BDP58876 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H2BDP58876 AP005117.1-202ENST00000581724 1908 ntBASIC13.04□□□□□ -0.32
HIST1H2BDP58876 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H2BDP58876 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
HIST1H2BDP58876 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H2BDP58876 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.04□□□□□ -0.32
HIST1H2BDP58876 KIRREL3-AS3-201ENST00000404882 831 ntBASIC13.04□□□□□ -0.32
HIST1H2BDP58876 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC13.04□□□□□ -0.32
HIST1H2BDP58876 RARRES2P4-201ENST00000514074 484 ntBASIC13.04□□□□□ -0.32
HIST1H2BDP58876 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
HIST1H2BDP58876 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC13.04□□□□□ -0.32
HIST1H2BDP58876 AL354811.1-201ENST00000610286 706 ntBASIC13.04□□□□□ -0.32
HIST1H2BDP58876 AL121832.2-201ENST00000610979 668 ntBASIC13.04□□□□□ -0.32
HIST1H2BDP58876 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC13.04□□□□□ -0.32
HIST1H2BDP58876 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H2BDP58876 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H2BDP58876 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
HIST1H2BDP58876 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
HIST1H2BDP58876 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H2BDP58876 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
HIST1H2BDP58876 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H2BDP58876 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H2BDP58876 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H2BDP58876 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H2BDP58876 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H2BDP58876 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
HIST1H2BDP58876 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H2BDP58876 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H2BDP58876 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H2BDP58876 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H2BDP58876 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H2BDP58876 AC009102.3-201ENST00000623118 1491 ntBASIC13.04□□□□□ -0.32
HIST1H2BDP58876 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
HIST1H2BDP58876 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H2BDP58876 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
HIST1H2BDP58876 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H2BDP58876 KRT8P41-201ENST00000533985 1514 ntBASIC13.03□□□□□ -0.32
HIST1H2BDP58876 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
HIST1H2BDP58876 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.03□□□□□ -0.32
HIST1H2BDP58876 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.03□□□□□ -0.32
HIST1H2BDP58876 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
HIST1H2BDP58876 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H2BDP58876 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H2BDP58876 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC13.03□□□□□ -0.32
HIST1H2BDP58876 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.03□□□□□ -0.32
HIST1H2BDP58876 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H2BDP58876 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC13.03□□□□□ -0.32
HIST1H2BDP58876 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H2BDP58876 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H2BDP58876 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.03□□□□□ -0.32
HIST1H2BDP58876 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H2BDP58876 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
HIST1H2BDP58876 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC13.03□□□□□ -0.32
HIST1H2BDP58876 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H2BDP58876 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC13.03□□□□□ -0.32
HIST1H2BDP58876 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC13.03□□□□□ -0.32
HIST1H2BDP58876 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
HIST1H2BDP58876 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC13.03□□□□□ -0.32
HIST1H2BDP58876 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC13.03□□□□□ -0.32
HIST1H2BDP58876 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC13.03□□□□□ -0.32
HIST1H2BDP58876 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H2BDP58876 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
HIST1H2BDP58876 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
HIST1H2BDP58876 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H2BDP58876 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.03□□□□□ -0.32
HIST1H2BDP58876 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H2BDP58876 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
HIST1H2BDP58876 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H2BDP58876 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC13.03□□□□□ -0.32
HIST1H2BDP58876 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H2BDP58876 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H2BDP58876 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
HIST1H2BDP58876 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
HIST1H2BDP58876 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H2BDP58876 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H2BDP58876 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H2BDP58876 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
HIST1H2BDP58876 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H2BDP58876 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H2BDP58876 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H2BDP58876 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H2BDP58876 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H2BDP58876 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H2BDP58876 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC13.03□□□□□ -0.32
HIST1H2BDP58876 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H2BDP58876 AL359183.1-201ENST00000623796 2132 ntBASIC13.03□□□□□ -0.32
HIST1H2BDP58876 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
HIST1H2BDP58876 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H2BDP58876 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms