Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CLDN6P56747 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.58■□□□□ 0.25
CLDN6P56747 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLDN6P56747 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
CLDN6P56747 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CLDN6P56747 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLDN6P56747 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLDN6P56747 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.58■□□□□ 0.25
CLDN6P56747 WIZP1-201ENST00000531444 2299 ntBASIC16.58■□□□□ 0.25
CLDN6P56747 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLDN6P56747 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
CLDN6P56747 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CLDN6P56747 AC009113.1-201ENST00000570267 2443 ntBASIC16.58■□□□□ 0.25
CLDN6P56747 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLDN6P56747 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLDN6P56747 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLDN6P56747 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN6P56747 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN6P56747 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN6P56747 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.58■□□□□ 0.24
CLDN6P56747 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN6P56747 AL627223.1-201ENST00000416693 442 ntBASIC16.58■□□□□ 0.24
CLDN6P56747 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.58■□□□□ 0.24
CLDN6P56747 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.58■□□□□ 0.24
CLDN6P56747 FAM185BP-201ENST00000443595 716 ntBASIC16.58■□□□□ 0.24
CLDN6P56747 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CLDN6P56747 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.58■□□□□ 0.24
CLDN6P56747 HLA-J-202ENST00000469281 1241 ntBASIC16.58■□□□□ 0.24
CLDN6P56747 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.58■□□□□ 0.24
CLDN6P56747 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.58■□□□□ 0.24
CLDN6P56747 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.58■□□□□ 0.24
CLDN6P56747 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.58■□□□□ 0.24
CLDN6P56747 AL590787.1-201ENST00000568856 1315 ntBASIC16.58■□□□□ 0.24
CLDN6P56747 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN6P56747 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN6P56747 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN6P56747 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN6P56747 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.58■□□□□ 0.24
CLDN6P56747 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
CLDN6P56747 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN6P56747 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.58■□□□□ 0.24
CLDN6P56747 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN6P56747 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.58■□□□□ 0.24
CLDN6P56747 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN6P56747 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN6P56747 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN6P56747 AC135776.1-201ENST00000319817 2481 ntBASIC16.58■□□□□ 0.24
CLDN6P56747 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN6P56747 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
CLDN6P56747 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN6P56747 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.58■□□□□ 0.24
CLDN6P56747 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN6P56747 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN6P56747 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CLDN6P56747 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
CLDN6P56747 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN6P56747 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN6P56747 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.57■□□□□ 0.24
CLDN6P56747 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN6P56747 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN6P56747 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN6P56747 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN6P56747 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN6P56747 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN6P56747 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CLDN6P56747 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN6P56747 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN6P56747 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
CLDN6P56747 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN6P56747 BX276092.7-203ENST00000637198 1536 ntBASIC16.57■□□□□ 0.24
CLDN6P56747 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN6P56747 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN6P56747 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN6P56747 MIR661-201ENST00000384842 89 ntBASIC16.57■□□□□ 0.24
CLDN6P56747 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN6P56747 AC015922.1-201ENST00000421102 1152 ntBASIC16.57■□□□□ 0.24
CLDN6P56747 AC005034.1-201ENST00000426657 489 ntBASIC16.57■□□□□ 0.24
CLDN6P56747 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.57■□□□□ 0.24
CLDN6P56747 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.57■□□□□ 0.24
CLDN6P56747 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.57■□□□□ 0.24
CLDN6P56747 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
CLDN6P56747 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.57■□□□□ 0.24
CLDN6P56747 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.57■□□□□ 0.24
CLDN6P56747 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.57■□□□□ 0.24
CLDN6P56747 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.57■□□□□ 0.24
CLDN6P56747 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.57■□□□□ 0.24
CLDN6P56747 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.57■□□□□ 0.24
CLDN6P56747 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.57■□□□□ 0.24
CLDN6P56747 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN6P56747 AL035252.4-201ENST00000624174 288 ntBASIC16.57■□□□□ 0.24
CLDN6P56747 AF228730.6-201ENST00000641497 218 ntBASIC16.57■□□□□ 0.24
CLDN6P56747 AC084121.3-201ENST00000641716 218 ntBASIC16.57■□□□□ 0.24
CLDN6P56747 AC105233.6-201ENST00000642093 218 ntBASIC16.57■□□□□ 0.24
CLDN6P56747 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN6P56747 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN6P56747 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN6P56747 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN6P56747 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CLDN6P56747 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN6P56747 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms