Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.18■□□□□ 0.02
FOXG1P55316 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.18■□□□□ 0.02
FOXG1P55316 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
FOXG1P55316 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.18■□□□□ 0.02
FOXG1P55316 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
FOXG1P55316 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
FOXG1P55316 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
FOXG1P55316 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
FOXG1P55316 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.18■□□□□ 0.02
FOXG1P55316 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
FOXG1P55316 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
FOXG1P55316 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
FOXG1P55316 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.18■□□□□ 0.02
FOXG1P55316 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.18■□□□□ 0.02
FOXG1P55316 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
FOXG1P55316 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
FOXG1P55316 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
FOXG1P55316 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC15.18■□□□□ 0.02
FOXG1P55316 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
FOXG1P55316 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
FOXG1P55316 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
FOXG1P55316 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
FOXG1P55316 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
FOXG1P55316 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.17■□□□□ 0.02
FOXG1P55316 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
FOXG1P55316 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
FOXG1P55316 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
FOXG1P55316 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
FOXG1P55316 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
FOXG1P55316 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC15.17■□□□□ 0.02
FOXG1P55316 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
FOXG1P55316 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
FOXG1P55316 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.17■□□□□ 0.02
FOXG1P55316 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
FOXG1P55316 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
FOXG1P55316 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
FOXG1P55316 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.17■□□□□ 0.02
FOXG1P55316 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
FOXG1P55316 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.17■□□□□ 0.02
FOXG1P55316 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
FOXG1P55316 RPL13AP23-201ENST00000480739 586 ntBASIC15.17■□□□□ 0.02
FOXG1P55316 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.17■□□□□ 0.02
FOXG1P55316 AC136632.2-201ENST00000512891 861 ntBASIC15.17■□□□□ 0.02
FOXG1P55316 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
FOXG1P55316 UNC93B6-202ENST00000528242 690 ntBASIC15.17■□□□□ 0.02
FOXG1P55316 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.17■□□□□ 0.02
FOXG1P55316 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.17■□□□□ 0.02
FOXG1P55316 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.17■□□□□ 0.02
FOXG1P55316 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.17■□□□□ 0.02
FOXG1P55316 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
FOXG1P55316 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.17■□□□□ 0.02
FOXG1P55316 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
FOXG1P55316 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.17■□□□□ 0.02
FOXG1P55316 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
FOXG1P55316 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
FOXG1P55316 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.17■□□□□ 0.02
FOXG1P55316 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.17■□□□□ 0.02
FOXG1P55316 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
FOXG1P55316 HCG11-201ENST00000411553 5696 ntBASIC15.17■□□□□ 0.02
FOXG1P55316 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.17■□□□□ 0.02
FOXG1P55316 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC15.16■□□□□ 0.02
FOXG1P55316 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
FOXG1P55316 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
FOXG1P55316 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
FOXG1P55316 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
FOXG1P55316 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
FOXG1P55316 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
FOXG1P55316 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
FOXG1P55316 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
FOXG1P55316 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
FOXG1P55316 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
FOXG1P55316 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.16■□□□□ 0.02
FOXG1P55316 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.16■□□□□ 0.02
FOXG1P55316 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.16■□□□□ 0.02
FOXG1P55316 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
FOXG1P55316 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
FOXG1P55316 AL645608.8-201ENST00000606034 2086 ntBASIC15.16■□□□□ 0.02
FOXG1P55316 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
FOXG1P55316 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
FOXG1P55316 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
FOXG1P55316 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
FOXG1P55316 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
FOXG1P55316 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.16■□□□□ 0.02
FOXG1P55316 AC104109.2-201ENST00000602919 1418 ntBASIC15.16■□□□□ 0.02
FOXG1P55316 AC026471.1-201ENST00000564629 3026 ntBASIC15.16■□□□□ 0.02
FOXG1P55316 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
FOXG1P55316 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.16■□□□□ 0.02
FOXG1P55316 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
FOXG1P55316 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
FOXG1P55316 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.15■□□□□ 0.02
FOXG1P55316 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
FOXG1P55316 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
FOXG1P55316 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
FOXG1P55316 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
FOXG1P55316 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
FOXG1P55316 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
FOXG1P55316 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
FOXG1P55316 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.15■□□□□ 0.02
FOXG1P55316 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
FOXG1P55316 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms