Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.99■□□□□ 0.63
ATN1P54259 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.99■□□□□ 0.63
ATN1P54259 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
ATN1P54259 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATN1P54259 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ATN1P54259 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.99■□□□□ 0.63
ATN1P54259 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.99■□□□□ 0.63
ATN1P54259 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATN1P54259 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ATN1P54259 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
ATN1P54259 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ATN1P54259 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATN1P54259 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.99■□□□□ 0.63
ATN1P54259 SPDYE7P-202ENST00000420373 878 ntBASIC18.99■□□□□ 0.63
ATN1P54259 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ATN1P54259 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATN1P54259 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATN1P54259 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.99■□□□□ 0.63
ATN1P54259 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATN1P54259 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
ATN1P54259 SERBP1P5-201ENST00000510079 1181 ntBASIC18.99■□□□□ 0.63
ATN1P54259 AC069120.2-201ENST00000524091 540 ntBASIC18.99■□□□□ 0.63
ATN1P54259 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ATN1P54259 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.99■□□□□ 0.63
ATN1P54259 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC18.99■□□□□ 0.63
ATN1P54259 AC027307.3-201ENST00000594262 1100 ntBASIC18.99■□□□□ 0.63
ATN1P54259 AL158211.3-201ENST00000607385 239 ntBASIC18.99■□□□□ 0.63
ATN1P54259 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ATN1P54259 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ATN1P54259 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATN1P54259 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.99■□□□□ 0.63
ATN1P54259 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATN1P54259 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
ATN1P54259 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC18.99■□□□□ 0.63
ATN1P54259 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ATN1P54259 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATN1P54259 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ATN1P54259 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATN1P54259 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATN1P54259 GNAS-203ENST00000306120 1878 ntBASIC18.99■□□□□ 0.63
ATN1P54259 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.98■□□□□ 0.63
ATN1P54259 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ATN1P54259 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATN1P54259 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATN1P54259 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
ATN1P54259 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.98■□□□□ 0.63
ATN1P54259 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATN1P54259 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ATN1P54259 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
ATN1P54259 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.98■□□□□ 0.63
ATN1P54259 TDG-209ENST00000544861 1387 ntTSL 2 BASIC18.98■□□□□ 0.63
ATN1P54259 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
ATN1P54259 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
ATN1P54259 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATN1P54259 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ATN1P54259 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ATN1P54259 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC18.98■□□□□ 0.63
ATN1P54259 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC18.98■□□□□ 0.63
ATN1P54259 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC18.98■□□□□ 0.63
ATN1P54259 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
ATN1P54259 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC18.98■□□□□ 0.63
ATN1P54259 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC18.98■□□□□ 0.63
ATN1P54259 NOP2-220ENST00000545915 630 ntTSL 2 BASIC18.98■□□□□ 0.63
ATN1P54259 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC18.98■□□□□ 0.63
ATN1P54259 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ATN1P54259 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
ATN1P54259 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC18.98■□□□□ 0.63
ATN1P54259 AL358472.5-202ENST00000641448 1267 ntBASIC18.98■□□□□ 0.63
ATN1P54259 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATN1P54259 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATN1P54259 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ATN1P54259 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATN1P54259 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
ATN1P54259 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
ATN1P54259 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
ATN1P54259 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.98■□□□□ 0.63
ATN1P54259 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATN1P54259 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATN1P54259 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATN1P54259 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATN1P54259 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATN1P54259 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATN1P54259 AL355478.1-201ENST00000431686 821 ntTSL 5 BASIC18.97■□□□□ 0.63
ATN1P54259 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC18.97■□□□□ 0.63
ATN1P54259 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ATN1P54259 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
ATN1P54259 AC107918.2-201ENST00000530817 355 ntBASIC18.97■□□□□ 0.63
ATN1P54259 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
ATN1P54259 THTPA-204ENST00000554970 569 ntTSL 4 BASIC18.97■□□□□ 0.63
ATN1P54259 THTPA-206ENST00000556015 535 ntTSL 3 BASIC18.97■□□□□ 0.63
ATN1P54259 LINC01225-203ENST00000563550 1244 ntBASIC18.97■□□□□ 0.63
ATN1P54259 INO80E-210ENST00000567705 880 ntTSL 3 BASIC18.97■□□□□ 0.63
ATN1P54259 AC025048.6-201ENST00000634326 1161 ntBASIC18.97■□□□□ 0.63
ATN1P54259 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATN1P54259 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ATN1P54259 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.97■□□□□ 0.63
ATN1P54259 AL020996.1-203ENST00000536896 2307 ntBASIC18.97■□□□□ 0.63
ATN1P54259 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATN1P54259 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
ATN1P54259 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms