Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NUBP1P53384 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NUBP1P53384 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NUBP1P53384 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.21■□□□□ 0.35
NUBP1P53384 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NUBP1P53384 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NUBP1P53384 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
NUBP1P53384 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.21■□□□□ 0.34
NUBP1P53384 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
NUBP1P53384 AC106872.6-201ENST00000514228 1346 ntBASIC17.21■□□□□ 0.34
NUBP1P53384 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.2■□□□□ 0.34
NUBP1P53384 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NUBP1P53384 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.2■□□□□ 0.34
NUBP1P53384 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
NUBP1P53384 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NUBP1P53384 MIR346-201ENST00000362234 95 ntBASIC17.2■□□□□ 0.34
NUBP1P53384 CDC23-201ENST00000394884 1079 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NUBP1P53384 MGST1-204ENST00000396209 979 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
NUBP1P53384 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC17.2■□□□□ 0.34
NUBP1P53384 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.2■□□□□ 0.34
NUBP1P53384 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NUBP1P53384 SLC25A6P2-201ENST00000497974 877 ntBASIC17.2■□□□□ 0.34
NUBP1P53384 AC122713.1-201ENST00000518368 1015 ntBASIC17.2■□□□□ 0.34
NUBP1P53384 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC17.2■□□□□ 0.34
NUBP1P53384 AC109635.5-201ENST00000533593 962 ntBASIC17.2■□□□□ 0.34
NUBP1P53384 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC17.2■□□□□ 0.34
NUBP1P53384 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.2■□□□□ 0.34
NUBP1P53384 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
NUBP1P53384 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NUBP1P53384 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
NUBP1P53384 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NUBP1P53384 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.2■□□□□ 0.34
NUBP1P53384 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
NUBP1P53384 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.2■□□□□ 0.34
NUBP1P53384 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
NUBP1P53384 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NUBP1P53384 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NUBP1P53384 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NUBP1P53384 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
NUBP1P53384 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NUBP1P53384 AL391825.1-201ENST00000457671 1364 ntBASIC17.19■□□□□ 0.34
NUBP1P53384 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.19■□□□□ 0.34
NUBP1P53384 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.19■□□□□ 0.34
NUBP1P53384 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
NUBP1P53384 AC093010.1-201ENST00000473625 1624 ntBASIC17.19■□□□□ 0.34
NUBP1P53384 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NUBP1P53384 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NUBP1P53384 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
NUBP1P53384 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NUBP1P53384 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC17.19■□□□□ 0.34
NUBP1P53384 AL512384.1-201ENST00000406683 331 ntBASIC17.19■□□□□ 0.34
NUBP1P53384 AP006294.1-201ENST00000415407 339 ntBASIC17.19■□□□□ 0.34
NUBP1P53384 SFR1P2-201ENST00000421841 730 ntBASIC17.19■□□□□ 0.34
NUBP1P53384 AC087163.2-201ENST00000457299 853 ntBASIC17.19■□□□□ 0.34
NUBP1P53384 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC17.19■□□□□ 0.34
NUBP1P53384 FAM8A2P-201ENST00000528813 1142 ntBASIC17.19■□□□□ 0.34
NUBP1P53384 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.19■□□□□ 0.34
NUBP1P53384 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NUBP1P53384 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC17.19■□□□□ 0.34
NUBP1P53384 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
NUBP1P53384 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.19■□□□□ 0.34
NUBP1P53384 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
NUBP1P53384 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC17.19■□□□□ 0.34
NUBP1P53384 AC106730.3-201ENST00000624568 641 ntBASIC17.19■□□□□ 0.34
NUBP1P53384 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC17.19■□□□□ 0.34
NUBP1P53384 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
NUBP1P53384 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.19■□□□□ 0.34
NUBP1P53384 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
NUBP1P53384 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NUBP1P53384 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
NUBP1P53384 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.19■□□□□ 0.34
NUBP1P53384 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.19■□□□□ 0.34
NUBP1P53384 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.19■□□□□ 0.34
NUBP1P53384 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
NUBP1P53384 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
NUBP1P53384 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NUBP1P53384 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NUBP1P53384 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
NUBP1P53384 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NUBP1P53384 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
NUBP1P53384 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
NUBP1P53384 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.18■□□□□ 0.34
NUBP1P53384 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NUBP1P53384 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NUBP1P53384 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
NUBP1P53384 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NUBP1P53384 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NUBP1P53384 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.18■□□□□ 0.34
NUBP1P53384 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
NUBP1P53384 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
NUBP1P53384 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NUBP1P53384 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NUBP1P53384 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NUBP1P53384 AC079776.1-201ENST00000401540 1152 ntBASIC17.18■□□□□ 0.34
NUBP1P53384 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NUBP1P53384 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NUBP1P53384 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.18■□□□□ 0.34
NUBP1P53384 RNU6-362P-201ENST00000516736 90 ntBASIC17.18■□□□□ 0.34
NUBP1P53384 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC17.18■□□□□ 0.34
NUBP1P53384 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms