Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC19.31■□□□□ 0.68
LBX1P52954 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LBX1P52954 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LBX1P52954 AL353705.2-201ENST00000428243 662 ntBASIC19.31■□□□□ 0.68
LBX1P52954 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC19.31■□□□□ 0.68
LBX1P52954 LDHBP1-201ENST00000455730 1119 ntBASIC19.31■□□□□ 0.68
LBX1P52954 AC007551.1-201ENST00000457394 519 ntBASIC19.31■□□□□ 0.68
LBX1P52954 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC19.31■□□□□ 0.68
LBX1P52954 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC19.31■□□□□ 0.68
LBX1P52954 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC19.31■□□□□ 0.68
LBX1P52954 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC19.31■□□□□ 0.68
LBX1P52954 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC19.31■□□□□ 0.68
LBX1P52954 WFDC1-204ENST00000613603 549 ntBASIC19.31■□□□□ 0.68
LBX1P52954 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.31■□□□□ 0.68
LBX1P52954 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LBX1P52954 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LBX1P52954 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LBX1P52954 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LBX1P52954 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.31■□□□□ 0.68
LBX1P52954 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LBX1P52954 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
LBX1P52954 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
LBX1P52954 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LBX1P52954 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LBX1P52954 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.3■□□□□ 0.68
LBX1P52954 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.3■□□□□ 0.68
LBX1P52954 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LBX1P52954 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
LBX1P52954 AL032819.2-201ENST00000624543 2162 ntBASIC19.3■□□□□ 0.68
LBX1P52954 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.3■□□□□ 0.68
LBX1P52954 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LBX1P52954 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LBX1P52954 PKD1P6-201ENST00000343738 4769 ntBASIC19.3■□□□□ 0.68
LBX1P52954 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LBX1P52954 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LBX1P52954 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC19.3■□□□□ 0.68
LBX1P52954 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.3■□□□□ 0.68
LBX1P52954 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LBX1P52954 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LBX1P52954 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LBX1P52954 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC19.3■□□□□ 0.68
LBX1P52954 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
LBX1P52954 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LBX1P52954 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC19.3■□□□□ 0.68
LBX1P52954 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LBX1P52954 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC19.3■□□□□ 0.68
LBX1P52954 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC19.3■□□□□ 0.68
LBX1P52954 RPS15-212ENST00000593052 629 ntTSL 2 BASIC19.3■□□□□ 0.68
LBX1P52954 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC19.3■□□□□ 0.68
LBX1P52954 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LBX1P52954 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
LBX1P52954 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
LBX1P52954 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
LBX1P52954 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
LBX1P52954 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LBX1P52954 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC19.3■□□□□ 0.68
LBX1P52954 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LBX1P52954 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.29■□□□□ 0.68
LBX1P52954 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.29■□□□□ 0.68
LBX1P52954 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LBX1P52954 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
LBX1P52954 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LBX1P52954 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
LBX1P52954 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
LBX1P52954 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LBX1P52954 AC098850.1-201ENST00000419919 790 ntBASIC19.29■□□□□ 0.68
LBX1P52954 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC19.29■□□□□ 0.68
LBX1P52954 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LBX1P52954 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC19.29■□□□□ 0.68
LBX1P52954 AC105233.2-201ENST00000523697 349 ntBASIC19.29■□□□□ 0.68
LBX1P52954 AF228730.5-201ENST00000530288 346 ntBASIC19.29■□□□□ 0.68
LBX1P52954 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
LBX1P52954 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC19.29■□□□□ 0.68
LBX1P52954 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
LBX1P52954 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC19.29■□□□□ 0.68
LBX1P52954 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LBX1P52954 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC19.29■□□□□ 0.68
LBX1P52954 AL135999.2-201ENST00000622438 1686 ntBASIC19.29■□□□□ 0.68
LBX1P52954 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
LBX1P52954 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LBX1P52954 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LBX1P52954 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LBX1P52954 AL049812.1-201ENST00000432563 2267 ntBASIC19.28■□□□□ 0.68
LBX1P52954 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LBX1P52954 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LBX1P52954 AC007375.3-201ENST00000600936 2314 ntBASIC19.28■□□□□ 0.68
LBX1P52954 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LBX1P52954 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LBX1P52954 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LBX1P52954 RPS19-201ENST00000221975 500 ntTSL 3 BASIC19.28■□□□□ 0.68
LBX1P52954 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LBX1P52954 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
LBX1P52954 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC19.28■□□□□ 0.68
LBX1P52954 FAM21FP-201ENST00000426241 1131 ntBASIC19.28■□□□□ 0.68
LBX1P52954 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LBX1P52954 AC253536.4-201ENST00000440539 267 ntBASIC19.28■□□□□ 0.68
LBX1P52954 CSF2RBP1-201ENST00000447905 391 ntBASIC19.28■□□□□ 0.68
LBX1P52954 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LBX1P52954 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC19.28■□□□□ 0.68
LBX1P52954 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms