Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.28■□□□□ 0.2
SMSP52788 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.28■□□□□ 0.2
SMSP52788 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMSP52788 FAM197Y8-203ENST00000450145 560 ntBASIC16.28■□□□□ 0.2
SMSP52788 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.28■□□□□ 0.2
SMSP52788 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SMSP52788 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMSP52788 AC008687.5-201ENST00000593746 558 ntBASIC16.28■□□□□ 0.2
SMSP52788 AL591684.3-201ENST00000605187 298 ntBASIC16.28■□□□□ 0.2
SMSP52788 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMSP52788 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMSP52788 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMSP52788 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMSP52788 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SMSP52788 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMSP52788 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMSP52788 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SMSP52788 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMSP52788 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.28■□□□□ 0.2
SMSP52788 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.28■□□□□ 0.2
SMSP52788 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SMSP52788 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMSP52788 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SMSP52788 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMSP52788 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMSP52788 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.28■□□□□ 0.2
SMSP52788 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.28■□□□□ 0.2
SMSP52788 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.28■□□□□ 0.2
SMSP52788 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMSP52788 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SMSP52788 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
SMSP52788 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMSP52788 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMSP52788 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
SMSP52788 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMSP52788 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.27■□□□□ 0.2
SMSP52788 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMSP52788 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
SMSP52788 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMSP52788 HLA-J-201ENST00000462773 1622 ntBASIC16.27■□□□□ 0.2
SMSP52788 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMSP52788 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.27■□□□□ 0.2
SMSP52788 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMSP52788 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMSP52788 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
SMSP52788 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMSP52788 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.27■□□□□ 0.2
SMSP52788 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMSP52788 NKILA-202ENST00000614771 2598 ntBASIC16.27■□□□□ 0.2
SMSP52788 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SMSP52788 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.27■□□□□ 0.2
SMSP52788 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMSP52788 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SMSP52788 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.27■□□□□ 0.2
SMSP52788 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.27■□□□□ 0.2
SMSP52788 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.27■□□□□ 0.2
SMSP52788 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.27■□□□□ 0.2
SMSP52788 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.27■□□□□ 0.2
SMSP52788 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SMSP52788 AF238378.1-201ENST00000526806 358 ntBASIC16.27■□□□□ 0.2
SMSP52788 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
SMSP52788 AF228730.7-201ENST00000641842 219 ntBASIC16.27■□□□□ 0.2
SMSP52788 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SMSP52788 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
SMSP52788 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
SMSP52788 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SMSP52788 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SMSP52788 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.27■□□□□ 0.19
SMSP52788 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SMSP52788 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.27■□□□□ 0.19
SMSP52788 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
SMSP52788 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
SMSP52788 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.27■□□□□ 0.19
SMSP52788 LINC00304-203ENST00000565008 1864 ntBASIC16.27■□□□□ 0.19
SMSP52788 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.19
SMSP52788 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
SMSP52788 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMSP52788 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
SMSP52788 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMSP52788 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SMSP52788 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SMSP52788 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SMSP52788 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMSP52788 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMSP52788 IL9RP2-201ENST00000423948 1312 ntBASIC16.26■□□□□ 0.19
SMSP52788 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMSP52788 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMSP52788 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.26■□□□□ 0.19
SMSP52788 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SMSP52788 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
SMSP52788 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMSP52788 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
SMSP52788 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMSP52788 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
SMSP52788 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMSP52788 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMSP52788 TSPY12P-201ENST00000421279 868 ntBASIC16.26■□□□□ 0.19
SMSP52788 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
SMSP52788 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.26■□□□□ 0.19
SMSP52788 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms