Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC30.56■■■□□ 2.48
SMARCA4P51532 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC30.56■■■□□ 2.48
SMARCA4P51532 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
SMARCA4P51532 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC30.56■■■□□ 2.48
SMARCA4P51532 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC30.56■■■□□ 2.48
SMARCA4P51532 REEP4-207ENST00000523293 913 ntTSL 3 BASIC30.56■■■□□ 2.48
SMARCA4P51532 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC30.56■■■□□ 2.48
SMARCA4P51532 TEX28P1-201ENST00000613479 1221 ntBASIC30.56■■■□□ 2.48
SMARCA4P51532 TEX28P2-201ENST00000617764 1221 ntBASIC30.56■■■□□ 2.48
SMARCA4P51532 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC30.56■■■□□ 2.48
SMARCA4P51532 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC30.56■■■□□ 2.48
SMARCA4P51532 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC30.56■■■□□ 2.48
SMARCA4P51532 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
SMARCA4P51532 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
SMARCA4P51532 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
SMARCA4P51532 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC30.56■■■□□ 2.48
SMARCA4P51532 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC30.56■■■□□ 2.48
SMARCA4P51532 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
SMARCA4P51532 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
SMARCA4P51532 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC30.55■■■□□ 2.48
SMARCA4P51532 AC140912.1-201ENST00000577171 1054 ntBASIC30.55■■■□□ 2.48
SMARCA4P51532 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC30.55■■■□□ 2.48
SMARCA4P51532 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC30.55■■■□□ 2.48
SMARCA4P51532 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
SMARCA4P51532 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
SMARCA4P51532 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC30.55■■■□□ 2.48
SMARCA4P51532 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
SMARCA4P51532 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
SMARCA4P51532 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC30.55■■■□□ 2.48
SMARCA4P51532 IGHV3-71-201ENST00000523324 359 ntBASIC30.55■■■□□ 2.48
SMARCA4P51532 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC30.55■■■□□ 2.48
SMARCA4P51532 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC30.55■■■□□ 2.48
SMARCA4P51532 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC30.55■■■□□ 2.48
SMARCA4P51532 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC30.54■■■□□ 2.48
SMARCA4P51532 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
SMARCA4P51532 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC30.54■■■□□ 2.48
SMARCA4P51532 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
SMARCA4P51532 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC30.54■■■□□ 2.48
SMARCA4P51532 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC30.54■■■□□ 2.48
SMARCA4P51532 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC30.54■■■□□ 2.48
SMARCA4P51532 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
SMARCA4P51532 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC30.54■■■□□ 2.48
SMARCA4P51532 HLA-V-204ENST00000476601 1289 ntBASIC30.54■■■□□ 2.48
SMARCA4P51532 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
SMARCA4P51532 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC30.54■■■□□ 2.48
SMARCA4P51532 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC30.54■■■□□ 2.48
SMARCA4P51532 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC30.54■■■□□ 2.48
SMARCA4P51532 GPER1-207ENST00000619052 571 ntTSL 2 BASIC30.54■■■□□ 2.48
SMARCA4P51532 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
SMARCA4P51532 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC30.54■■■□□ 2.48
SMARCA4P51532 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
SMARCA4P51532 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC30.53■■■□□ 2.48
SMARCA4P51532 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC30.53■■■□□ 2.48
SMARCA4P51532 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC30.53■■■□□ 2.48
SMARCA4P51532 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC30.53■■■□□ 2.48
SMARCA4P51532 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC30.53■■■□□ 2.48
SMARCA4P51532 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
SMARCA4P51532 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
SMARCA4P51532 AL080243.2-201ENST00000418783 582 ntBASIC30.53■■■□□ 2.48
SMARCA4P51532 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC30.53■■■□□ 2.48
SMARCA4P51532 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC30.53■■■□□ 2.48
SMARCA4P51532 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC30.53■■■□□ 2.48
SMARCA4P51532 API5-211ENST00000534695 560 ntTSL 5 BASIC30.53■■■□□ 2.48
SMARCA4P51532 AC004233.3-201ENST00000607794 1269 ntBASIC30.53■■■□□ 2.48
SMARCA4P51532 AC018529.1-201ENST00000613063 361 ntBASIC30.53■■■□□ 2.48
SMARCA4P51532 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC30.53■■■□□ 2.48
SMARCA4P51532 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
SMARCA4P51532 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
SMARCA4P51532 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC30.52■■■□□ 2.48
SMARCA4P51532 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC30.52■■■□□ 2.48
SMARCA4P51532 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC30.52■■■□□ 2.48
SMARCA4P51532 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC30.52■■■□□ 2.48
SMARCA4P51532 CDK4-206ENST00000549606 558 ntTSL 2 BASIC30.52■■■□□ 2.48
SMARCA4P51532 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC30.52■■■□□ 2.48
SMARCA4P51532 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC30.52■■■□□ 2.48
SMARCA4P51532 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC30.52■■■□□ 2.48
SMARCA4P51532 AP3S2-216ENST00000617003 1561 ntBASIC30.52■■■□□ 2.48
SMARCA4P51532 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC30.52■■■□□ 2.48
SMARCA4P51532 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
SMARCA4P51532 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
SMARCA4P51532 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC30.51■■■□□ 2.48
SMARCA4P51532 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC30.51■■■□□ 2.48
SMARCA4P51532 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC30.51■■■□□ 2.48
SMARCA4P51532 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC30.51■■■□□ 2.48
SMARCA4P51532 HILS1-202ENST00000545329 423 ntBASIC30.51■■■□□ 2.48
SMARCA4P51532 MPI-209ENST00000564003 1195 ntTSL 2 BASIC30.51■■■□□ 2.48
SMARCA4P51532 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC30.51■■■□□ 2.48
SMARCA4P51532 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC30.51■■■□□ 2.48
SMARCA4P51532 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC30.51■■■□□ 2.48
SMARCA4P51532 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC30.51■■■□□ 2.48
SMARCA4P51532 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC30.51■■■□□ 2.48
SMARCA4P51532 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC30.51■■■□□ 2.48
SMARCA4P51532 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
SMARCA4P51532 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC30.51■■■□□ 2.47
SMARCA4P51532 HARS-204ENST00000438307 1789 ntTSL 2 BASIC30.51■■■□□ 2.47
SMARCA4P51532 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
SMARCA4P51532 GRAMD4P3-201ENST00000621665 1669 ntBASIC30.51■■■□□ 2.47
SMARCA4P51532 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
SMARCA4P51532 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC30.51■■■□□ 2.47
SMARCA4P51532 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms