Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 AC138969.3-201ENST00000546612 1459 ntBASIC30.33■■■□□ 2.45
SMARCA2P51531 AC138932.2-201ENST00000548268 1459 ntBASIC30.33■■■□□ 2.45
SMARCA2P51531 AC126755.4-201ENST00000549796 1459 ntBASIC30.33■■■□□ 2.45
SMARCA2P51531 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC30.33■■■□□ 2.45
SMARCA2P51531 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.45
SMARCA2P51531 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC30.32■■■□□ 2.45
SMARCA2P51531 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.45
SMARCA2P51531 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC30.32■■■□□ 2.45
SMARCA2P51531 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC30.32■■■□□ 2.45
SMARCA2P51531 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC30.32■■■□□ 2.45
SMARCA2P51531 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC30.32■■■□□ 2.45
SMARCA2P51531 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC30.32■■■□□ 2.45
SMARCA2P51531 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC30.32■■■□□ 2.45
SMARCA2P51531 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC30.32■■■□□ 2.44
SMARCA2P51531 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC30.32■■■□□ 2.44
SMARCA2P51531 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
SMARCA2P51531 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC30.32■■■□□ 2.44
SMARCA2P51531 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
SMARCA2P51531 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC30.32■■■□□ 2.44
SMARCA2P51531 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
SMARCA2P51531 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC30.32■■■□□ 2.44
SMARCA2P51531 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC30.32■■■□□ 2.44
SMARCA2P51531 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
SMARCA2P51531 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
SMARCA2P51531 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC30.32■■■□□ 2.44
SMARCA2P51531 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
SMARCA2P51531 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC30.32■■■□□ 2.44
SMARCA2P51531 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC30.32■■■□□ 2.44
SMARCA2P51531 ACA64.2-201ENST00000459014 129 ntBASIC30.32■■■□□ 2.44
SMARCA2P51531 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC30.32■■■□□ 2.44
SMARCA2P51531 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC30.32■■■□□ 2.44
SMARCA2P51531 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC30.32■■■□□ 2.44
SMARCA2P51531 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC30.32■■■□□ 2.44
SMARCA2P51531 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
SMARCA2P51531 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
SMARCA2P51531 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC30.31■■■□□ 2.44
SMARCA2P51531 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
SMARCA2P51531 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
SMARCA2P51531 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
SMARCA2P51531 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC30.31■■■□□ 2.44
SMARCA2P51531 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC30.31■■■□□ 2.44
SMARCA2P51531 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
SMARCA2P51531 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
SMARCA2P51531 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC30.31■■■□□ 2.44
SMARCA2P51531 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC30.31■■■□□ 2.44
SMARCA2P51531 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC30.31■■■□□ 2.44
SMARCA2P51531 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
SMARCA2P51531 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
SMARCA2P51531 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
SMARCA2P51531 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC30.3■■■□□ 2.44
SMARCA2P51531 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC30.3■■■□□ 2.44
SMARCA2P51531 REXO1L9P-201ENST00000604264 2108 ntBASIC30.3■■■□□ 2.44
SMARCA2P51531 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
SMARCA2P51531 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
SMARCA2P51531 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
SMARCA2P51531 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
SMARCA2P51531 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
SMARCA2P51531 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC30.3■■■□□ 2.44
SMARCA2P51531 PGF-202ENST00000405431 666 ntTSL 5 BASIC30.3■■■□□ 2.44
SMARCA2P51531 PTPA-220ENST00000436883 532 ntTSL 4 BASIC30.3■■■□□ 2.44
SMARCA2P51531 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC30.3■■■□□ 2.44
SMARCA2P51531 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC30.3■■■□□ 2.44
SMARCA2P51531 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC30.3■■■□□ 2.44
SMARCA2P51531 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC30.3■■■□□ 2.44
SMARCA2P51531 MNT-208ENST00000575394 606 ntTSL 4 BASIC30.3■■■□□ 2.44
SMARCA2P51531 PRR29-204ENST00000577953 565 ntTSL 4 BASIC30.3■■■□□ 2.44
SMARCA2P51531 AC004790.1-201ENST00000612686 536 ntBASIC30.3■■■□□ 2.44
SMARCA2P51531 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC30.3■■■□□ 2.44
SMARCA2P51531 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
SMARCA2P51531 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
SMARCA2P51531 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
SMARCA2P51531 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC30.29■■■□□ 2.44
SMARCA2P51531 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
SMARCA2P51531 ZNF890P-202ENST00000530367 1156 ntBASIC30.29■■■□□ 2.44
SMARCA2P51531 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC30.29■■■□□ 2.44
SMARCA2P51531 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC30.29■■■□□ 2.44
SMARCA2P51531 AC009407.1-201ENST00000568958 598 ntBASIC30.29■■■□□ 2.44
SMARCA2P51531 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC30.29■■■□□ 2.44
SMARCA2P51531 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC30.29■■■□□ 2.44
SMARCA2P51531 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC30.29■■■□□ 2.44
SMARCA2P51531 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC30.29■■■□□ 2.44
SMARCA2P51531 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC30.29■■■□□ 2.44
SMARCA2P51531 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC30.29■■■□□ 2.44
SMARCA2P51531 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC30.29■■■□□ 2.44
SMARCA2P51531 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC30.29■■■□□ 2.44
SMARCA2P51531 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
SMARCA2P51531 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC30.29■■■□□ 2.44
SMARCA2P51531 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC30.29■■■□□ 2.44
SMARCA2P51531 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC30.29■■■□□ 2.44
SMARCA2P51531 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
SMARCA2P51531 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
SMARCA2P51531 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC30.28■■■□□ 2.44
SMARCA2P51531 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC30.28■■■□□ 2.44
SMARCA2P51531 AC245100.3-201ENST00000441281 285 ntBASIC30.28■■■□□ 2.44
SMARCA2P51531 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC30.28■■■□□ 2.44
SMARCA2P51531 STOM-203ENST00000538954 1257 ntTSL 5 BASIC30.28■■■□□ 2.44
SMARCA2P51531 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC30.28■■■□□ 2.44
SMARCA2P51531 AC017083.2-201ENST00000608069 979 ntBASIC30.28■■■□□ 2.44
SMARCA2P51531 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC30.28■■■□□ 2.44
SMARCA2P51531 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC30.28■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms