Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDE6CP51160 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.74■□□□□ 0.59
PDE6CP51160 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
PDE6CP51160 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.74■□□□□ 0.59
PDE6CP51160 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDE6CP51160 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.74■□□□□ 0.59
PDE6CP51160 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDE6CP51160 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDE6CP51160 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PDE6CP51160 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.74■□□□□ 0.59
PDE6CP51160 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDE6CP51160 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDE6CP51160 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDE6CP51160 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDE6CP51160 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.74■□□□□ 0.59
PDE6CP51160 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDE6CP51160 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDE6CP51160 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDE6CP51160 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.74■□□□□ 0.59
PDE6CP51160 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDE6CP51160 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDE6CP51160 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.74■□□□□ 0.59
PDE6CP51160 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDE6CP51160 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDE6CP51160 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.74■□□□□ 0.59
PDE6CP51160 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDE6CP51160 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.74■□□□□ 0.59
PDE6CP51160 AC109462.3-201ENST00000573934 613 ntBASIC18.74■□□□□ 0.59
PDE6CP51160 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.74■□□□□ 0.59
PDE6CP51160 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
PDE6CP51160 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDE6CP51160 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.74■□□□□ 0.59
PDE6CP51160 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PDE6CP51160 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.74■□□□□ 0.59
PDE6CP51160 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.74■□□□□ 0.59
PDE6CP51160 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
PDE6CP51160 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDE6CP51160 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDE6CP51160 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDE6CP51160 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDE6CP51160 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDE6CP51160 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.73■□□□□ 0.59
PDE6CP51160 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDE6CP51160 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDE6CP51160 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDE6CP51160 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.73■□□□□ 0.59
PDE6CP51160 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PDE6CP51160 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDE6CP51160 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.73■□□□□ 0.59
PDE6CP51160 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
PDE6CP51160 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDE6CP51160 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.73■□□□□ 0.59
PDE6CP51160 AKR1C7P-201ENST00000305623 895 ntBASIC18.73■□□□□ 0.59
PDE6CP51160 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.73■□□□□ 0.59
PDE6CP51160 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.73■□□□□ 0.59
PDE6CP51160 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDE6CP51160 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.73■□□□□ 0.59
PDE6CP51160 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.73■□□□□ 0.59
PDE6CP51160 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.73■□□□□ 0.59
PDE6CP51160 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PDE6CP51160 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PDE6CP51160 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.73■□□□□ 0.59
PDE6CP51160 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.73■□□□□ 0.59
PDE6CP51160 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDE6CP51160 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDE6CP51160 AP001094.4-201ENST00000579008 2176 ntBASIC18.73■□□□□ 0.59
PDE6CP51160 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDE6CP51160 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDE6CP51160 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PDE6CP51160 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDE6CP51160 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.73■□□□□ 0.59
PDE6CP51160 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.73■□□□□ 0.59
PDE6CP51160 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDE6CP51160 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDE6CP51160 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
PDE6CP51160 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.73■□□□□ 0.59
PDE6CP51160 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDE6CP51160 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.73■□□□□ 0.59
PDE6CP51160 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDE6CP51160 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
PDE6CP51160 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
PDE6CP51160 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PDE6CP51160 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
PDE6CP51160 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDE6CP51160 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.72■□□□□ 0.59
PDE6CP51160 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
PDE6CP51160 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDE6CP51160 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.72■□□□□ 0.59
PDE6CP51160 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDE6CP51160 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.72■□□□□ 0.59
PDE6CP51160 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.72■□□□□ 0.59
PDE6CP51160 AC103564.2-201ENST00000432853 1299 ntBASIC18.72■□□□□ 0.59
PDE6CP51160 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.72■□□□□ 0.59
PDE6CP51160 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.72■□□□□ 0.59
PDE6CP51160 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.72■□□□□ 0.59
PDE6CP51160 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.72■□□□□ 0.59
PDE6CP51160 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.72■□□□□ 0.59
PDE6CP51160 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.72■□□□□ 0.59
PDE6CP51160 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.72■□□□□ 0.59
PDE6CP51160 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms