Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC15.43■□□□□ 0.06
SRP9P49458 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC15.43■□□□□ 0.06
SRP9P49458 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC15.43■□□□□ 0.06
SRP9P49458 TPM1-226ENST00000560959 925 ntTSL 2 BASIC15.43■□□□□ 0.06
SRP9P49458 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SRP9P49458 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SRP9P49458 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
SRP9P49458 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SRP9P49458 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
SRP9P49458 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SRP9P49458 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.43■□□□□ 0.06
SRP9P49458 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SRP9P49458 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
SRP9P49458 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15.43■□□□□ 0.06
SRP9P49458 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SRP9P49458 LINC01126-201ENST00000623515 1646 ntBASIC15.43■□□□□ 0.06
SRP9P49458 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SRP9P49458 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SRP9P49458 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SRP9P49458 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC15.43■□□□□ 0.06
SRP9P49458 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.42■□□□□ 0.06
SRP9P49458 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SRP9P49458 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.42■□□□□ 0.06
SRP9P49458 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
SRP9P49458 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.42■□□□□ 0.06
SRP9P49458 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SRP9P49458 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SRP9P49458 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SRP9P49458 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SRP9P49458 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.42■□□□□ 0.06
SRP9P49458 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SRP9P49458 BAALC-202ENST00000306391 243 ntTSL 5 BASIC15.42■□□□□ 0.06
SRP9P49458 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SRP9P49458 BAALC-204ENST00000330955 222 ntTSL 5 BASIC15.42■□□□□ 0.06
SRP9P49458 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SRP9P49458 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SRP9P49458 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC15.42■□□□□ 0.06
SRP9P49458 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC15.42■□□□□ 0.06
SRP9P49458 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC15.42■□□□□ 0.06
SRP9P49458 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SRP9P49458 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC15.42■□□□□ 0.06
SRP9P49458 TK1-205ENST00000590862 642 ntTSL 3 BASIC15.42■□□□□ 0.06
SRP9P49458 GPR32P1-201ENST00000601788 811 ntBASIC15.42■□□□□ 0.06
SRP9P49458 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC15.42■□□□□ 0.06
SRP9P49458 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
SRP9P49458 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SRP9P49458 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SRP9P49458 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
SRP9P49458 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SRP9P49458 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
SRP9P49458 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
SRP9P49458 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC15.42■□□□□ 0.06
SRP9P49458 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SRP9P49458 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SRP9P49458 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SRP9P49458 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
SRP9P49458 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.42■□□□□ 0.06
SRP9P49458 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SRP9P49458 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SRP9P49458 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SRP9P49458 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SRP9P49458 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SRP9P49458 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SRP9P49458 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.41■□□□□ 0.06
SRP9P49458 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SRP9P49458 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.41■□□□□ 0.06
SRP9P49458 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SRP9P49458 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SRP9P49458 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
SRP9P49458 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
SRP9P49458 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.41■□□□□ 0.06
SRP9P49458 HES2-202ENST00000377836 507 ntTSL 2 BASIC15.41■□□□□ 0.06
SRP9P49458 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
SRP9P49458 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC15.41■□□□□ 0.06
SRP9P49458 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SRP9P49458 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.41■□□□□ 0.06
SRP9P49458 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.41■□□□□ 0.06
SRP9P49458 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
SRP9P49458 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC15.41■□□□□ 0.06
SRP9P49458 FAM86EP-206ENST00000510506 987 ntBASIC15.41■□□□□ 0.06
SRP9P49458 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC15.41■□□□□ 0.06
SRP9P49458 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC15.41■□□□□ 0.06
SRP9P49458 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
SRP9P49458 AC091076.1-201ENST00000610741 619 ntBASIC15.41■□□□□ 0.06
SRP9P49458 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC15.41■□□□□ 0.06
SRP9P49458 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC15.41■□□□□ 0.06
SRP9P49458 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
SRP9P49458 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.41■□□□□ 0.06
SRP9P49458 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.41■□□□□ 0.06
SRP9P49458 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
SRP9P49458 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SRP9P49458 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.41■□□□□ 0.06
SRP9P49458 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SRP9P49458 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
SRP9P49458 AC060834.1-201ENST00000443027 2032 ntBASIC15.41■□□□□ 0.06
SRP9P49458 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SRP9P49458 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SRP9P49458 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
SRP9P49458 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SRP9P49458 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms