Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
KRT6CP48668 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
KRT6CP48668 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.83■□□□□ 0.29
KRT6CP48668 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
KRT6CP48668 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
KRT6CP48668 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
KRT6CP48668 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
KRT6CP48668 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
KRT6CP48668 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT6CP48668 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT6CP48668 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
KRT6CP48668 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
KRT6CP48668 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT6CP48668 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
KRT6CP48668 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT6CP48668 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.83■□□□□ 0.28
KRT6CP48668 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.83■□□□□ 0.28
KRT6CP48668 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.83■□□□□ 0.28
KRT6CP48668 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.83■□□□□ 0.28
KRT6CP48668 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.83■□□□□ 0.28
KRT6CP48668 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT6CP48668 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
KRT6CP48668 AC009533.2-201ENST00000543664 586 ntBASIC16.83■□□□□ 0.28
KRT6CP48668 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
KRT6CP48668 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT6CP48668 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.83■□□□□ 0.28
KRT6CP48668 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.83■□□□□ 0.28
KRT6CP48668 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.83■□□□□ 0.28
KRT6CP48668 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.83■□□□□ 0.28
KRT6CP48668 AC093525.9-201ENST00000624961 1746 ntBASIC16.83■□□□□ 0.28
KRT6CP48668 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.83■□□□□ 0.28
KRT6CP48668 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.83■□□□□ 0.28
KRT6CP48668 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.83■□□□□ 0.28
KRT6CP48668 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT6CP48668 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT6CP48668 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.83■□□□□ 0.28
KRT6CP48668 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT6CP48668 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT6CP48668 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.82■□□□□ 0.28
KRT6CP48668 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
KRT6CP48668 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
KRT6CP48668 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT6CP48668 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
KRT6CP48668 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
KRT6CP48668 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.82■□□□□ 0.28
KRT6CP48668 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.82■□□□□ 0.28
KRT6CP48668 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT6CP48668 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
KRT6CP48668 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT6CP48668 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.82■□□□□ 0.28
KRT6CP48668 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
KRT6CP48668 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
KRT6CP48668 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT6CP48668 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
KRT6CP48668 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.82■□□□□ 0.28
KRT6CP48668 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT6CP48668 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.82■□□□□ 0.28
KRT6CP48668 AL031133.1-201ENST00000406807 723 ntBASIC16.82■□□□□ 0.28
KRT6CP48668 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.82■□□□□ 0.28
KRT6CP48668 CHCHD2P8-201ENST00000429873 447 ntBASIC16.82■□□□□ 0.28
KRT6CP48668 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.82■□□□□ 0.28
KRT6CP48668 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT6CP48668 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.82■□□□□ 0.28
KRT6CP48668 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KRT6CP48668 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT6CP48668 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT6CP48668 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT6CP48668 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT6CP48668 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT6CP48668 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT6CP48668 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
KRT6CP48668 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
KRT6CP48668 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.82■□□□□ 0.28
KRT6CP48668 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT6CP48668 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
KRT6CP48668 LINC02012-201ENST00000608206 1725 ntBASIC16.82■□□□□ 0.28
KRT6CP48668 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KRT6CP48668 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
KRT6CP48668 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KRT6CP48668 AL049757.1-201ENST00000616842 1596 ntBASIC16.81■□□□□ 0.28
KRT6CP48668 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
KRT6CP48668 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KRT6CP48668 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT6CP48668 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT6CP48668 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT6CP48668 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT6CP48668 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT6CP48668 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
KRT6CP48668 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.81■□□□□ 0.28
KRT6CP48668 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KRT6CP48668 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
KRT6CP48668 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
KRT6CP48668 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT6CP48668 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT6CP48668 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT6CP48668 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT6CP48668 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.81■□□□□ 0.28
KRT6CP48668 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT6CP48668 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KRT6CP48668 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms