Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.52■□□□□ 0.24
KRT20P35900 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.52■□□□□ 0.24
KRT20P35900 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.52■□□□□ 0.24
KRT20P35900 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.52■□□□□ 0.24
KRT20P35900 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
KRT20P35900 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.52■□□□□ 0.24
KRT20P35900 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.52■□□□□ 0.24
KRT20P35900 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
KRT20P35900 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.52■□□□□ 0.24
KRT20P35900 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
KRT20P35900 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.52■□□□□ 0.24
KRT20P35900 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
KRT20P35900 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
KRT20P35900 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.52■□□□□ 0.23
KRT20P35900 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.52■□□□□ 0.23
KRT20P35900 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
KRT20P35900 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
KRT20P35900 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
KRT20P35900 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
KRT20P35900 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
KRT20P35900 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.52■□□□□ 0.23
KRT20P35900 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
KRT20P35900 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
KRT20P35900 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.51■□□□□ 0.23
KRT20P35900 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
KRT20P35900 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.51■□□□□ 0.23
KRT20P35900 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
KRT20P35900 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.51■□□□□ 0.23
KRT20P35900 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
KRT20P35900 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.51■□□□□ 0.23
KRT20P35900 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT20P35900 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.51■□□□□ 0.23
KRT20P35900 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
KRT20P35900 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
KRT20P35900 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
KRT20P35900 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.51■□□□□ 0.23
KRT20P35900 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT20P35900 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT20P35900 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT20P35900 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
KRT20P35900 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
KRT20P35900 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
KRT20P35900 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
KRT20P35900 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.51■□□□□ 0.23
KRT20P35900 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
KRT20P35900 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT20P35900 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT20P35900 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT20P35900 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
KRT20P35900 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT20P35900 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.51■□□□□ 0.23
KRT20P35900 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
KRT20P35900 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.51■□□□□ 0.23
KRT20P35900 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
KRT20P35900 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT20P35900 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.51■□□□□ 0.23
KRT20P35900 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT20P35900 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.51■□□□□ 0.23
KRT20P35900 AL138688.1-201ENST00000624851 1594 ntBASIC16.51■□□□□ 0.23
KRT20P35900 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT20P35900 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT20P35900 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.51■□□□□ 0.23
KRT20P35900 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT20P35900 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT20P35900 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT20P35900 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.5■□□□□ 0.23
KRT20P35900 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT20P35900 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT20P35900 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.5■□□□□ 0.23
KRT20P35900 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT20P35900 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT20P35900 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT20P35900 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.5■□□□□ 0.23
KRT20P35900 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
KRT20P35900 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT20P35900 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.5■□□□□ 0.23
KRT20P35900 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
KRT20P35900 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
KRT20P35900 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.5■□□□□ 0.23
KRT20P35900 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
KRT20P35900 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT20P35900 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
KRT20P35900 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
KRT20P35900 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
KRT20P35900 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT20P35900 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT20P35900 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
KRT20P35900 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
KRT20P35900 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
KRT20P35900 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
KRT20P35900 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT20P35900 Z69720.1-201ENST00000601483 472 ntBASIC16.5■□□□□ 0.23
KRT20P35900 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.5■□□□□ 0.23
KRT20P35900 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
KRT20P35900 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
KRT20P35900 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT20P35900 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
KRT20P35900 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT20P35900 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT20P35900 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms