Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFC1P35251 AC009336.1-201ENST00000608941 1553 ntBASIC18.29■□□□□ 0.52
RFC1P35251 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFC1P35251 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
RFC1P35251 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFC1P35251 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFC1P35251 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RFC1P35251 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
RFC1P35251 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RFC1P35251 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.28■□□□□ 0.52
RFC1P35251 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.28■□□□□ 0.52
RFC1P35251 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RFC1P35251 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.28■□□□□ 0.52
RFC1P35251 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFC1P35251 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFC1P35251 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFC1P35251 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.28■□□□□ 0.52
RFC1P35251 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.28■□□□□ 0.52
RFC1P35251 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
RFC1P35251 FOSL1P1-201ENST00000511041 816 ntBASIC18.28■□□□□ 0.52
RFC1P35251 STK19B-204ENST00000512515 211 ntBASIC18.28■□□□□ 0.52
RFC1P35251 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.28■□□□□ 0.52
RFC1P35251 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.28■□□□□ 0.52
RFC1P35251 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.28■□□□□ 0.52
RFC1P35251 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
RFC1P35251 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.28■□□□□ 0.52
RFC1P35251 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.28■□□□□ 0.52
RFC1P35251 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.28■□□□□ 0.52
RFC1P35251 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.28■□□□□ 0.52
RFC1P35251 AP000867.4-201ENST00000641616 219 ntBASIC18.28■□□□□ 0.52
RFC1P35251 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.28■□□□□ 0.52
RFC1P35251 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFC1P35251 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.28■□□□□ 0.52
RFC1P35251 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFC1P35251 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFC1P35251 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFC1P35251 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.28■□□□□ 0.52
RFC1P35251 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.28■□□□□ 0.52
RFC1P35251 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFC1P35251 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFC1P35251 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
RFC1P35251 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
RFC1P35251 AC022211.2-201ENST00000585075 2527 ntBASIC18.27■□□□□ 0.52
RFC1P35251 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RFC1P35251 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFC1P35251 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
RFC1P35251 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
RFC1P35251 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.27■□□□□ 0.52
RFC1P35251 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFC1P35251 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RFC1P35251 AC003669.1-201ENST00000334569 611 ntBASIC18.27■□□□□ 0.52
RFC1P35251 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.27■□□□□ 0.52
RFC1P35251 KRT16P4-201ENST00000453883 522 ntBASIC18.27■□□□□ 0.52
RFC1P35251 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.27■□□□□ 0.52
RFC1P35251 MIR3652-201ENST00000579335 131 ntBASIC18.27■□□□□ 0.52
RFC1P35251 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.27■□□□□ 0.52
RFC1P35251 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.27■□□□□ 0.52
RFC1P35251 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFC1P35251 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RFC1P35251 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.27■□□□□ 0.52
RFC1P35251 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
RFC1P35251 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
RFC1P35251 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFC1P35251 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFC1P35251 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RFC1P35251 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RFC1P35251 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
RFC1P35251 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
RFC1P35251 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
RFC1P35251 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.27■□□□□ 0.51
RFC1P35251 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RFC1P35251 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
RFC1P35251 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.27■□□□□ 0.51
RFC1P35251 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
RFC1P35251 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RFC1P35251 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFC1P35251 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RFC1P35251 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RFC1P35251 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RFC1P35251 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFC1P35251 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
RFC1P35251 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.26■□□□□ 0.51
RFC1P35251 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFC1P35251 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFC1P35251 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.26■□□□□ 0.51
RFC1P35251 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.26■□□□□ 0.51
RFC1P35251 ABCD1P5-201ENST00000445663 754 ntBASIC18.26■□□□□ 0.51
RFC1P35251 NUS1P1-201ENST00000446295 882 ntBASIC18.26■□□□□ 0.51
RFC1P35251 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.26■□□□□ 0.51
RFC1P35251 AL591684.3-201ENST00000605187 298 ntBASIC18.26■□□□□ 0.51
RFC1P35251 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
RFC1P35251 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFC1P35251 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFC1P35251 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFC1P35251 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFC1P35251 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFC1P35251 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFC1P35251 AC093525.9-201ENST00000624961 1746 ntBASIC18.26■□□□□ 0.51
RFC1P35251 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RFC1P35251 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms