Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
HOXA13P31271 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HOXA13P31271 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.69■□□□□ 0.74
HOXA13P31271 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXA13P31271 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.68■□□□□ 0.74
HOXA13P31271 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.68■□□□□ 0.74
HOXA13P31271 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.68■□□□□ 0.74
HOXA13P31271 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.68■□□□□ 0.74
HOXA13P31271 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
HOXA13P31271 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HOXA13P31271 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.68■□□□□ 0.74
HOXA13P31271 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
HOXA13P31271 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXA13P31271 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
HOXA13P31271 NABP1-203ENST00000409510 843 ntTSL 5 BASIC19.68■□□□□ 0.74
HOXA13P31271 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
HOXA13P31271 IGLL3P-201ENST00000412472 434 ntBASIC19.68■□□□□ 0.74
HOXA13P31271 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.68■□□□□ 0.74
HOXA13P31271 PRSS29P-201ENST00000440800 595 ntBASIC19.68■□□□□ 0.74
HOXA13P31271 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.68■□□□□ 0.74
HOXA13P31271 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.68■□□□□ 0.74
HOXA13P31271 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC19.68■□□□□ 0.74
HOXA13P31271 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXA13P31271 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC19.68■□□□□ 0.74
HOXA13P31271 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC19.68■□□□□ 0.74
HOXA13P31271 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXA13P31271 TPR-209ENST00000613151 2478 ntTSL 5 BASIC19.68■□□□□ 0.74
HOXA13P31271 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXA13P31271 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HOXA13P31271 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19.68■□□□□ 0.74
HOXA13P31271 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
HOXA13P31271 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXA13P31271 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXA13P31271 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HOXA13P31271 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXA13P31271 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXA13P31271 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC19.68■□□□□ 0.74
HOXA13P31271 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXA13P31271 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXA13P31271 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC19.68■□□□□ 0.74
HOXA13P31271 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
HOXA13P31271 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HOXA13P31271 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXA13P31271 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXA13P31271 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXA13P31271 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXA13P31271 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXA13P31271 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
HOXA13P31271 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC19.67■□□□□ 0.74
HOXA13P31271 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HOXA13P31271 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
HOXA13P31271 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXA13P31271 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXA13P31271 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HOXA13P31271 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HOXA13P31271 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC19.67■□□□□ 0.74
HOXA13P31271 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC19.67■□□□□ 0.74
HOXA13P31271 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.67■□□□□ 0.74
HOXA13P31271 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC19.67■□□□□ 0.74
HOXA13P31271 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HOXA13P31271 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.67■□□□□ 0.74
HOXA13P31271 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXA13P31271 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC19.67■□□□□ 0.74
HOXA13P31271 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXA13P31271 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXA13P31271 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
HOXA13P31271 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXA13P31271 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.66■□□□□ 0.74
HOXA13P31271 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA13P31271 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC19.66■□□□□ 0.74
HOXA13P31271 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA13P31271 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
HOXA13P31271 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
HOXA13P31271 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA13P31271 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC19.66■□□□□ 0.74
HOXA13P31271 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
HOXA13P31271 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA13P31271 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC19.66■□□□□ 0.74
HOXA13P31271 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA13P31271 POLD4-207ENST00000531239 584 ntTSL 2 BASIC19.66■□□□□ 0.74
HOXA13P31271 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC19.66■□□□□ 0.74
HOXA13P31271 AC040169.1-201ENST00000565382 521 ntBASIC19.66■□□□□ 0.74
HOXA13P31271 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC19.66■□□□□ 0.74
HOXA13P31271 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC19.66■□□□□ 0.74
HOXA13P31271 GPALPP1-207ENST00000611650 899 ntBASIC19.66■□□□□ 0.74
HOXA13P31271 AC010654.1-201ENST00000615722 808 ntBASIC19.66■□□□□ 0.74
HOXA13P31271 GGTLC5P-201ENST00000617623 998 ntBASIC19.66■□□□□ 0.74
HOXA13P31271 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
HOXA13P31271 AC092865.6-201ENST00000642101 219 ntBASIC19.66■□□□□ 0.74
HOXA13P31271 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
HOXA13P31271 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA13P31271 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA13P31271 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXA13P31271 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXA13P31271 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC19.65■□□□□ 0.74
HOXA13P31271 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.65■□□□□ 0.74
HOXA13P31271 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXA13P31271 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXA13P31271 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
HOXA13P31271 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms