Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN6P29350 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN6P29350 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
PTPN6P29350 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
PTPN6P29350 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.46■□□□□ 0.22
PTPN6P29350 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.22
PTPN6P29350 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN6P29350 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN6P29350 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN6P29350 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN6P29350 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN6P29350 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN6P29350 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN6P29350 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PTPN6P29350 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN6P29350 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
PTPN6P29350 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PTPN6P29350 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN6P29350 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN6P29350 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.45■□□□□ 0.22
PTPN6P29350 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.45■□□□□ 0.22
PTPN6P29350 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN6P29350 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.45■□□□□ 0.22
PTPN6P29350 AL845331.1-201ENST00000424978 1190 ntBASIC16.45■□□□□ 0.22
PTPN6P29350 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.45■□□□□ 0.22
PTPN6P29350 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PTPN6P29350 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN6P29350 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
PTPN6P29350 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.45■□□□□ 0.22
PTPN6P29350 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN6P29350 AL049757.1-201ENST00000616842 1596 ntBASIC16.45■□□□□ 0.22
PTPN6P29350 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN6P29350 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN6P29350 PKD1P1-201ENST00000458669 6805 ntBASIC16.45■□□□□ 0.22
PTPN6P29350 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PTPN6P29350 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN6P29350 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN6P29350 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN6P29350 RNF216P1-203ENST00000404404 2427 ntBASIC16.45■□□□□ 0.22
PTPN6P29350 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN6P29350 AC125634.1-201ENST00000438758 1403 ntBASIC16.45■□□□□ 0.22
PTPN6P29350 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
PTPN6P29350 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTPN6P29350 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTPN6P29350 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PTPN6P29350 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PTPN6P29350 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.44■□□□□ 0.22
PTPN6P29350 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
PTPN6P29350 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
PTPN6P29350 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PTPN6P29350 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PTPN6P29350 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTPN6P29350 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTPN6P29350 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.44■□□□□ 0.22
PTPN6P29350 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
PTPN6P29350 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.44■□□□□ 0.22
PTPN6P29350 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTPN6P29350 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
PTPN6P29350 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
PTPN6P29350 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.44■□□□□ 0.22
PTPN6P29350 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PTPN6P29350 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.44■□□□□ 0.22
PTPN6P29350 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
PTPN6P29350 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PTPN6P29350 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.44■□□□□ 0.22
PTPN6P29350 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.44■□□□□ 0.22
PTPN6P29350 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTPN6P29350 MYCLP1-201ENST00000372451 1075 ntBASIC16.44■□□□□ 0.22
PTPN6P29350 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.44■□□□□ 0.22
PTPN6P29350 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.44■□□□□ 0.22
PTPN6P29350 LINC00265-3P-201ENST00000447588 903 ntBASIC16.44■□□□□ 0.22
PTPN6P29350 TOB2P1-201ENST00000469761 992 ntBASIC16.44■□□□□ 0.22
PTPN6P29350 AC109462.3-201ENST00000573934 613 ntBASIC16.44■□□□□ 0.22
PTPN6P29350 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTPN6P29350 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.44■□□□□ 0.22
PTPN6P29350 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.44■□□□□ 0.22
PTPN6P29350 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.44■□□□□ 0.22
PTPN6P29350 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTPN6P29350 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
PTPN6P29350 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTPN6P29350 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.44■□□□□ 0.22
PTPN6P29350 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.44■□□□□ 0.22
PTPN6P29350 AC078925.2-201ENST00000624013 1973 ntBASIC16.44■□□□□ 0.22
PTPN6P29350 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.44■□□□□ 0.22
PTPN6P29350 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTPN6P29350 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
PTPN6P29350 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.44■□□□□ 0.22
PTPN6P29350 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTPN6P29350 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PTPN6P29350 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PTPN6P29350 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PTPN6P29350 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
PTPN6P29350 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.43■□□□□ 0.22
PTPN6P29350 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PTPN6P29350 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.43■□□□□ 0.22
PTPN6P29350 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.43■□□□□ 0.22
PTPN6P29350 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PTPN6P29350 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
PTPN6P29350 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
PTPN6P29350 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms