Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
XRCC1P18887 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.31■□□□□ 0.36
XRCC1P18887 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.31■□□□□ 0.36
XRCC1P18887 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.31■□□□□ 0.36
XRCC1P18887 ABCD1P5-201ENST00000445663 754 ntBASIC17.31■□□□□ 0.36
XRCC1P18887 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.31■□□□□ 0.36
XRCC1P18887 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.31■□□□□ 0.36
XRCC1P18887 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
XRCC1P18887 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
XRCC1P18887 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
XRCC1P18887 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
XRCC1P18887 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
XRCC1P18887 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.31■□□□□ 0.36
XRCC1P18887 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.31■□□□□ 0.36
XRCC1P18887 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
XRCC1P18887 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.31■□□□□ 0.36
XRCC1P18887 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.31■□□□□ 0.36
XRCC1P18887 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
XRCC1P18887 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.31■□□□□ 0.36
XRCC1P18887 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
XRCC1P18887 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
XRCC1P18887 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
XRCC1P18887 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
XRCC1P18887 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
XRCC1P18887 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
XRCC1P18887 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.3■□□□□ 0.36
XRCC1P18887 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
XRCC1P18887 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
XRCC1P18887 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
XRCC1P18887 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
XRCC1P18887 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.3■□□□□ 0.36
XRCC1P18887 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
XRCC1P18887 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
XRCC1P18887 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
XRCC1P18887 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
XRCC1P18887 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
XRCC1P18887 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.3■□□□□ 0.36
XRCC1P18887 AC009078.2-202ENST00000463353 338 ntBASIC17.3■□□□□ 0.36
XRCC1P18887 AC122714.2-201ENST00000502787 707 ntBASIC17.3■□□□□ 0.36
XRCC1P18887 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
XRCC1P18887 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.3■□□□□ 0.36
XRCC1P18887 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.3■□□□□ 0.36
XRCC1P18887 AL355877.3-201ENST00000622820 899 ntBASIC17.3■□□□□ 0.36
XRCC1P18887 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
XRCC1P18887 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.3■□□□□ 0.36
XRCC1P18887 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
XRCC1P18887 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
XRCC1P18887 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
XRCC1P18887 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
XRCC1P18887 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
XRCC1P18887 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
XRCC1P18887 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
XRCC1P18887 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.3■□□□□ 0.36
XRCC1P18887 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
XRCC1P18887 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
XRCC1P18887 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
XRCC1P18887 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
XRCC1P18887 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
XRCC1P18887 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
XRCC1P18887 AP005117.1-201ENST00000584346 1413 ntBASIC17.3■□□□□ 0.36
XRCC1P18887 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
XRCC1P18887 AC008894.3-201ENST00000624324 3103 ntBASIC17.3■□□□□ 0.36
XRCC1P18887 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
XRCC1P18887 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
XRCC1P18887 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
XRCC1P18887 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
XRCC1P18887 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
XRCC1P18887 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.29■□□□□ 0.36
XRCC1P18887 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.29■□□□□ 0.36
XRCC1P18887 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
XRCC1P18887 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
XRCC1P18887 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
XRCC1P18887 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
XRCC1P18887 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
XRCC1P18887 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.29■□□□□ 0.36
XRCC1P18887 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
XRCC1P18887 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
XRCC1P18887 AL662844.1-201ENST00000546340 181 ntBASIC17.29■□□□□ 0.36
XRCC1P18887 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.29■□□□□ 0.36
XRCC1P18887 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
XRCC1P18887 AC008608.2-201ENST00000606089 416 ntBASIC17.29■□□□□ 0.36
XRCC1P18887 AP001269.4-201ENST00000609611 512 ntBASIC17.29■□□□□ 0.36
XRCC1P18887 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.29■□□□□ 0.36
XRCC1P18887 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.29■□□□□ 0.36
XRCC1P18887 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
XRCC1P18887 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
XRCC1P18887 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.29■□□□□ 0.36
XRCC1P18887 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
XRCC1P18887 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.29■□□□□ 0.36
XRCC1P18887 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.29■□□□□ 0.36
XRCC1P18887 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.29■□□□□ 0.36
XRCC1P18887 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
XRCC1P18887 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
XRCC1P18887 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
XRCC1P18887 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
XRCC1P18887 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
XRCC1P18887 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.29■□□□□ 0.36
XRCC1P18887 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.29■□□□□ 0.36
XRCC1P18887 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
XRCC1P18887 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms