Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC20.91■□□□□ 0.94
COL11A2P13942 BANF1P1-201ENST00000553684 263 ntBASIC20.91■□□□□ 0.94
COL11A2P13942 COQ6-210ENST00000554920 649 ntTSL 3 BASIC20.91■□□□□ 0.94
COL11A2P13942 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC20.91■□□□□ 0.94
COL11A2P13942 AL358472.5-202ENST00000641448 1267 ntBASIC20.91■□□□□ 0.94
COL11A2P13942 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
COL11A2P13942 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
COL11A2P13942 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
COL11A2P13942 AC138028.4-201ENST00000564984 1845 ntBASIC20.9■□□□□ 0.94
COL11A2P13942 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL11A2P13942 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC20.9■□□□□ 0.94
COL11A2P13942 PIN1P1-201ENST00000412108 996 ntBASIC20.9■□□□□ 0.94
COL11A2P13942 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC20.9■□□□□ 0.94
COL11A2P13942 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC20.9■□□□□ 0.94
COL11A2P13942 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC20.9■□□□□ 0.94
COL11A2P13942 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC20.9■□□□□ 0.94
COL11A2P13942 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL11A2P13942 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
COL11A2P13942 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC20.9■□□□□ 0.94
COL11A2P13942 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
COL11A2P13942 NKG7-205ENST00000600427 520 ntTSL 3 BASIC20.9■□□□□ 0.94
COL11A2P13942 SERF2-217ENST00000630046 862 ntTSL 5 BASIC20.9■□□□□ 0.94
COL11A2P13942 HARS-204ENST00000438307 1789 ntTSL 2 BASIC20.9■□□□□ 0.94
COL11A2P13942 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COL11A2P13942 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.9■□□□□ 0.94
COL11A2P13942 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COL11A2P13942 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
COL11A2P13942 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL11A2P13942 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.9■□□□□ 0.94
COL11A2P13942 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
COL11A2P13942 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL11A2P13942 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COL11A2P13942 MIR346-201ENST00000362234 95 ntBASIC20.9■□□□□ 0.94
COL11A2P13942 LY6E-204ENST00000519546 971 ntTSL 2 BASIC20.9■□□□□ 0.94
COL11A2P13942 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC20.9■□□□□ 0.94
COL11A2P13942 AL844908.2-201ENST00000609461 460 ntBASIC20.9■□□□□ 0.94
COL11A2P13942 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL11A2P13942 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
COL11A2P13942 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC20.89■□□□□ 0.94
COL11A2P13942 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
COL11A2P13942 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COL11A2P13942 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COL11A2P13942 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
COL11A2P13942 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
COL11A2P13942 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
COL11A2P13942 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COL11A2P13942 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
COL11A2P13942 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC20.89■□□□□ 0.93
COL11A2P13942 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC20.89■□□□□ 0.93
COL11A2P13942 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC20.89■□□□□ 0.93
COL11A2P13942 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
COL11A2P13942 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.93
COL11A2P13942 HNRNPA3P1-201ENST00000401429 1139 ntBASIC20.89■□□□□ 0.93
COL11A2P13942 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC20.89■□□□□ 0.93
COL11A2P13942 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC20.89■□□□□ 0.93
COL11A2P13942 HNRNPA3P5-201ENST00000455201 833 ntBASIC20.89■□□□□ 0.93
COL11A2P13942 AC105233.2-201ENST00000523697 349 ntBASIC20.89■□□□□ 0.93
COL11A2P13942 AC027369.6-201ENST00000525520 931 ntBASIC20.89■□□□□ 0.93
COL11A2P13942 AF228730.5-201ENST00000530288 346 ntBASIC20.89■□□□□ 0.93
COL11A2P13942 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC20.89■□□□□ 0.93
COL11A2P13942 AL008721.1-201ENST00000609964 604 ntBASIC20.89■□□□□ 0.93
COL11A2P13942 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC20.89■□□□□ 0.93
COL11A2P13942 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
COL11A2P13942 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
COL11A2P13942 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.89■□□□□ 0.93
COL11A2P13942 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC20.88■□□□□ 0.93
COL11A2P13942 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL11A2P13942 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
COL11A2P13942 LINC00895-201ENST00000629028 1637 ntBASIC20.88■□□□□ 0.93
COL11A2P13942 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.88■□□□□ 0.93
COL11A2P13942 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.88■□□□□ 0.93
COL11A2P13942 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.88■□□□□ 0.93
COL11A2P13942 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC20.88■□□□□ 0.93
COL11A2P13942 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL11A2P13942 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL11A2P13942 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
COL11A2P13942 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
COL11A2P13942 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC20.88■□□□□ 0.93
COL11A2P13942 PGF-202ENST00000405431 666 ntTSL 5 BASIC20.88■□□□□ 0.93
COL11A2P13942 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC20.88■□□□□ 0.93
COL11A2P13942 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC20.88■□□□□ 0.93
COL11A2P13942 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC20.88■□□□□ 0.93
COL11A2P13942 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC20.88■□□□□ 0.93
COL11A2P13942 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL11A2P13942 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC20.88■□□□□ 0.93
COL11A2P13942 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
COL11A2P13942 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.88■□□□□ 0.93
COL11A2P13942 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL11A2P13942 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
COL11A2P13942 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
COL11A2P13942 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC20.88■□□□□ 0.93
COL11A2P13942 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC20.87■□□□□ 0.93
COL11A2P13942 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC20.87■□□□□ 0.93
COL11A2P13942 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
COL11A2P13942 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.87■□□□□ 0.93
COL11A2P13942 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
COL11A2P13942 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC20.87■□□□□ 0.93
COL11A2P13942 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL11A2P13942 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL11A2P13942 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms