Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD28P10747 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD28P10747 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD28P10747 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CD28P10747 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD28P10747 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
CD28P10747 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD28P10747 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC13.56□□□□□ -0.24
CD28P10747 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC13.56□□□□□ -0.24
CD28P10747 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC13.56□□□□□ -0.24
CD28P10747 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD28P10747 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CD28P10747 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CD28P10747 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CD28P10747 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CD28P10747 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
CD28P10747 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC13.56□□□□□ -0.24
CD28P10747 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC13.56□□□□□ -0.24
CD28P10747 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
CD28P10747 VN2R19P-201ENST00000442399 1052 ntBASIC13.56□□□□□ -0.24
CD28P10747 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC13.56□□□□□ -0.24
CD28P10747 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD28P10747 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC13.56□□□□□ -0.24
CD28P10747 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC13.56□□□□□ -0.24
CD28P10747 AC018845.2-201ENST00000568326 409 ntBASIC13.56□□□□□ -0.24
CD28P10747 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC13.56□□□□□ -0.24
CD28P10747 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC13.56□□□□□ -0.24
CD28P10747 AC008667.4-201ENST00000607370 168 ntBASIC13.56□□□□□ -0.24
CD28P10747 AC134684.3-201ENST00000641758 218 ntBASIC13.56□□□□□ -0.24
CD28P10747 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC13.56□□□□□ -0.24
CD28P10747 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CD28P10747 AC009336.1-201ENST00000608941 1553 ntBASIC13.56□□□□□ -0.24
CD28P10747 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CD28P10747 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD28P10747 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CD28P10747 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD28P10747 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD28P10747 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CD28P10747 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CD28P10747 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CD28P10747 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC13.56□□□□□ -0.24
CD28P10747 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CD28P10747 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC13.56□□□□□ -0.24
CD28P10747 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
CD28P10747 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC13.56□□□□□ -0.24
CD28P10747 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CD28P10747 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC13.56□□□□□ -0.24
CD28P10747 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CD28P10747 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD28P10747 HARS-201ENST00000307633 1780 ntTSL 2 BASIC13.55□□□□□ -0.24
CD28P10747 AC090164.3-201ENST00000610780 2143 ntBASIC13.55□□□□□ -0.24
CD28P10747 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC13.55□□□□□ -0.24
CD28P10747 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC13.55□□□□□ -0.24
CD28P10747 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD28P10747 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC13.55□□□□□ -0.24
CD28P10747 AL390961.4-201ENST00000623958 2535 ntBASIC13.55□□□□□ -0.24
CD28P10747 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD28P10747 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD28P10747 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD28P10747 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC13.55□□□□□ -0.24
CD28P10747 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC13.55□□□□□ -0.24
CD28P10747 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD28P10747 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC13.55□□□□□ -0.24
CD28P10747 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD28P10747 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD28P10747 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CD28P10747 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CD28P10747 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD28P10747 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC13.55□□□□□ -0.24
CD28P10747 AC004967.1-201ENST00000453589 447 ntBASIC13.55□□□□□ -0.24
CD28P10747 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD28P10747 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CD28P10747 IGHV3-65-201ENST00000523210 341 ntBASIC13.55□□□□□ -0.24
CD28P10747 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC13.55□□□□□ -0.24
CD28P10747 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC13.55□□□□□ -0.24
CD28P10747 AP001160.2-201ENST00000596071 487 ntBASIC13.55□□□□□ -0.24
CD28P10747 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC13.55□□□□□ -0.24
CD28P10747 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD28P10747 AC079781.4-201ENST00000641908 219 ntBASIC13.55□□□□□ -0.24
CD28P10747 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC13.55□□□□□ -0.24
CD28P10747 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD28P10747 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD28P10747 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CD28P10747 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD28P10747 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CD28P10747 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
CD28P10747 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD28P10747 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC13.55□□□□□ -0.24
CD28P10747 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD28P10747 AC005332.8-201ENST00000622750 2735 ntBASIC13.55□□□□□ -0.24
CD28P10747 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CD28P10747 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD28P10747 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD28P10747 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC13.54□□□□□ -0.24
CD28P10747 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD28P10747 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD28P10747 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC13.54□□□□□ -0.24
CD28P10747 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC13.54□□□□□ -0.24
CD28P10747 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CD28P10747 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms