Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.97■□□□□ 0.63
CLTAP09496 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLTAP09496 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLTAP09496 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLTAP09496 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLTAP09496 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLTAP09496 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.97■□□□□ 0.63
CLTAP09496 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.97■□□□□ 0.63
CLTAP09496 AC107918.4-202ENST00000641623 219 ntBASIC18.97■□□□□ 0.63
CLTAP09496 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLTAP09496 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.97■□□□□ 0.63
CLTAP09496 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLTAP09496 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLTAP09496 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLTAP09496 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.97■□□□□ 0.63
CLTAP09496 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLTAP09496 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CLTAP09496 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLTAP09496 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLTAP09496 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLTAP09496 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.97■□□□□ 0.63
CLTAP09496 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLTAP09496 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLTAP09496 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLTAP09496 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.97■□□□□ 0.63
CLTAP09496 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLTAP09496 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLTAP09496 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLTAP09496 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLTAP09496 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLTAP09496 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLTAP09496 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CLTAP09496 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
CLTAP09496 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLTAP09496 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLTAP09496 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLTAP09496 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
CLTAP09496 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.96■□□□□ 0.63
CLTAP09496 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLTAP09496 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.96■□□□□ 0.63
CLTAP09496 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLTAP09496 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLTAP09496 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLTAP09496 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CLTAP09496 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CLTAP09496 LAGE3P1-201ENST00000425356 484 ntBASIC18.96■□□□□ 0.63
CLTAP09496 AC093909.1-201ENST00000504731 1122 ntBASIC18.96■□□□□ 0.63
CLTAP09496 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CLTAP09496 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.96■□□□□ 0.63
CLTAP09496 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CLTAP09496 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLTAP09496 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLTAP09496 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.96■□□□□ 0.63
CLTAP09496 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLTAP09496 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CLTAP09496 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLTAP09496 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLTAP09496 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
CLTAP09496 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLTAP09496 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLTAP09496 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CLTAP09496 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CLTAP09496 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.95■□□□□ 0.62
CLTAP09496 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLTAP09496 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CLTAP09496 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLTAP09496 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLTAP09496 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.95■□□□□ 0.62
CLTAP09496 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.95■□□□□ 0.62
CLTAP09496 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CLTAP09496 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.95■□□□□ 0.62
CLTAP09496 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.95■□□□□ 0.62
CLTAP09496 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.95■□□□□ 0.62
CLTAP09496 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.95■□□□□ 0.62
CLTAP09496 AC079776.4-201ENST00000511039 504 ntBASIC18.95■□□□□ 0.62
CLTAP09496 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.95■□□□□ 0.62
CLTAP09496 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.95■□□□□ 0.62
CLTAP09496 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.95■□□□□ 0.62
CLTAP09496 AL589182.2-201ENST00000619332 1049 ntBASIC18.95■□□□□ 0.62
CLTAP09496 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLTAP09496 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLTAP09496 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLTAP09496 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLTAP09496 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.95■□□□□ 0.62
CLTAP09496 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.95■□□□□ 0.62
CLTAP09496 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLTAP09496 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLTAP09496 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CLTAP09496 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CLTAP09496 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CLTAP09496 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLTAP09496 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLTAP09496 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLTAP09496 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.94■□□□□ 0.62
CLTAP09496 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLTAP09496 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.94■□□□□ 0.62
CLTAP09496 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLTAP09496 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.94■□□□□ 0.62
CLTAP09496 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CLTAP09496 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms