Protein–RNA interactions for Protein: P04626

ERBB2, Receptor tyrosine-protein kinase erbB-2, humanhuman

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2P04626 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
ERBB2P04626 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.2■□□□□ 0.5
ERBB2P04626 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
ERBB2P04626 TP73-AS1-207ENST00000624167 988 ntBASIC18.2■□□□□ 0.5
ERBB2P04626 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
ERBB2P04626 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
ERBB2P04626 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ERBB2P04626 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ERBB2P04626 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ERBB2P04626 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.2■□□□□ 0.5
ERBB2P04626 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.2■□□□□ 0.5
ERBB2P04626 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ERBB2P04626 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
ERBB2P04626 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ERBB2P04626 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ERBB2P04626 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ERBB2P04626 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ERBB2P04626 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ERBB2P04626 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ERBB2P04626 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ERBB2P04626 AC022211.2-201ENST00000585075 2527 ntBASIC18.19■□□□□ 0.5
ERBB2P04626 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ERBB2P04626 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ERBB2P04626 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ERBB2P04626 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ERBB2P04626 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ERBB2P04626 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ERBB2P04626 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ERBB2P04626 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
ERBB2P04626 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.19■□□□□ 0.5
ERBB2P04626 ACTG1P4-201ENST00000425123 1122 ntBASIC18.19■□□□□ 0.5
ERBB2P04626 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ERBB2P04626 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.19■□□□□ 0.5
ERBB2P04626 KRT126P-201ENST00000549467 1181 ntBASIC18.19■□□□□ 0.5
ERBB2P04626 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.19■□□□□ 0.5
ERBB2P04626 AC021087.4-201ENST00000563761 564 ntBASIC18.19■□□□□ 0.5
ERBB2P04626 RN7SL510P-201ENST00000581311 263 ntBASIC18.19■□□□□ 0.5
ERBB2P04626 MTDHP4-201ENST00000600287 670 ntBASIC18.19■□□□□ 0.5
ERBB2P04626 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ERBB2P04626 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ERBB2P04626 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ERBB2P04626 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.19■□□□□ 0.5
ERBB2P04626 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.19■□□□□ 0.5
ERBB2P04626 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.19■□□□□ 0.5
ERBB2P04626 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ERBB2P04626 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
ERBB2P04626 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ERBB2P04626 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
ERBB2P04626 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.19■□□□□ 0.5
ERBB2P04626 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ERBB2P04626 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ERBB2P04626 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ERBB2P04626 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.18■□□□□ 0.5
ERBB2P04626 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
ERBB2P04626 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ERBB2P04626 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
ERBB2P04626 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
ERBB2P04626 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
ERBB2P04626 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
ERBB2P04626 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.18■□□□□ 0.5
ERBB2P04626 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ERBB2P04626 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ERBB2P04626 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ERBB2P04626 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.18■□□□□ 0.5
ERBB2P04626 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ERBB2P04626 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ERBB2P04626 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
ERBB2P04626 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ERBB2P04626 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
ERBB2P04626 AC079781.3-201ENST00000449110 356 ntBASIC18.18■□□□□ 0.5
ERBB2P04626 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.18■□□□□ 0.5
ERBB2P04626 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.18■□□□□ 0.5
ERBB2P04626 AC025062.2-201ENST00000605477 670 ntBASIC18.18■□□□□ 0.5
ERBB2P04626 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
ERBB2P04626 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ERBB2P04626 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
ERBB2P04626 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ERBB2P04626 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ERBB2P04626 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ERBB2P04626 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ERBB2P04626 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
ERBB2P04626 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ERBB2P04626 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.18■□□□□ 0.5
ERBB2P04626 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
ERBB2P04626 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
ERBB2P04626 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ERBB2P04626 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ERBB2P04626 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ERBB2P04626 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ERBB2P04626 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
ERBB2P04626 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.17■□□□□ 0.5
ERBB2P04626 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
ERBB2P04626 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.17■□□□□ 0.5
ERBB2P04626 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
ERBB2P04626 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ERBB2P04626 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ERBB2P04626 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
ERBB2P04626 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.17■□□□□ 0.5
ERBB2P04626 SCARNA2-201ENST00000458748 420 ntBASIC18.17■□□□□ 0.5
ERBB2P04626 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms