Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.93■□□□□ 0.62
VTNP04004 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
VTNP04004 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.93■□□□□ 0.62
VTNP04004 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.93■□□□□ 0.62
VTNP04004 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VTNP04004 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
VTNP04004 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VTNP04004 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
VTNP04004 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
VTNP04004 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VTNP04004 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
VTNP04004 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VTNP04004 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VTNP04004 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VTNP04004 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.92■□□□□ 0.62
VTNP04004 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC18.92■□□□□ 0.62
VTNP04004 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VTNP04004 HTR5BP-201ENST00000430851 1154 ntBASIC18.92■□□□□ 0.62
VTNP04004 AC087163.2-201ENST00000457299 853 ntBASIC18.92■□□□□ 0.62
VTNP04004 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.92■□□□□ 0.62
VTNP04004 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.92■□□□□ 0.62
VTNP04004 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.92■□□□□ 0.62
VTNP04004 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.92■□□□□ 0.62
VTNP04004 AL596442.2-201ENST00000610240 980 ntBASIC18.92■□□□□ 0.62
VTNP04004 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
VTNP04004 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VTNP04004 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VTNP04004 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VTNP04004 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
VTNP04004 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.92■□□□□ 0.62
VTNP04004 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VTNP04004 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
VTNP04004 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VTNP04004 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
VTNP04004 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.91■□□□□ 0.62
VTNP04004 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
VTNP04004 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VTNP04004 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.91■□□□□ 0.62
VTNP04004 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VTNP04004 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
VTNP04004 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.91■□□□□ 0.62
VTNP04004 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
VTNP04004 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.91■□□□□ 0.62
VTNP04004 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VTNP04004 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
VTNP04004 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
VTNP04004 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VTNP04004 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
VTNP04004 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
VTNP04004 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC18.91■□□□□ 0.62
VTNP04004 YBX1P5-201ENST00000509441 847 ntBASIC18.91■□□□□ 0.62
VTNP04004 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.91■□□□□ 0.62
VTNP04004 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VTNP04004 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.91■□□□□ 0.62
VTNP04004 AC023141.13-201ENST00000604991 943 ntBASIC18.91■□□□□ 0.62
VTNP04004 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.91■□□□□ 0.62
VTNP04004 AC079781.4-201ENST00000641908 219 ntBASIC18.91■□□□□ 0.62
VTNP04004 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
VTNP04004 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.91■□□□□ 0.62
VTNP04004 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.91■□□□□ 0.62
VTNP04004 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
VTNP04004 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.91■□□□□ 0.62
VTNP04004 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
VTNP04004 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VTNP04004 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
VTNP04004 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
VTNP04004 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
VTNP04004 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VTNP04004 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VTNP04004 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
VTNP04004 AC134043.2-201ENST00000624206 2238 ntBASIC18.9■□□□□ 0.62
VTNP04004 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
VTNP04004 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
VTNP04004 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.9■□□□□ 0.62
VTNP04004 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VTNP04004 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
VTNP04004 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VTNP04004 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.9■□□□□ 0.62
VTNP04004 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
VTNP04004 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.9■□□□□ 0.62
VTNP04004 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
VTNP04004 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.9■□□□□ 0.62
VTNP04004 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VTNP04004 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.9■□□□□ 0.62
VTNP04004 URGCP-206ENST00000446958 365 ntTSL 2 BASIC18.9■□□□□ 0.62
VTNP04004 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
VTNP04004 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.9■□□□□ 0.62
VTNP04004 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.9■□□□□ 0.62
VTNP04004 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
VTNP04004 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.9■□□□□ 0.62
VTNP04004 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
VTNP04004 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.9■□□□□ 0.62
VTNP04004 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VTNP04004 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.9■□□□□ 0.62
VTNP04004 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.9■□□□□ 0.62
VTNP04004 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.9■□□□□ 0.62
VTNP04004 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
VTNP04004 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
VTNP04004 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
VTNP04004 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms