Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TIMP1P01033 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TIMP1P01033 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TIMP1P01033 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.54■□□□□ 0.56
TIMP1P01033 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TIMP1P01033 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.54■□□□□ 0.56
TIMP1P01033 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TIMP1P01033 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TIMP1P01033 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TIMP1P01033 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.54■□□□□ 0.56
TIMP1P01033 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.54■□□□□ 0.56
TIMP1P01033 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TIMP1P01033 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.54■□□□□ 0.56
TIMP1P01033 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.54■□□□□ 0.56
TIMP1P01033 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
TIMP1P01033 AL353732.1-201ENST00000569618 1459 ntBASIC18.54■□□□□ 0.56
TIMP1P01033 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
TIMP1P01033 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TIMP1P01033 ARSEP1-201ENST00000420443 635 ntBASIC18.54■□□□□ 0.56
TIMP1P01033 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC18.54■□□□□ 0.56
TIMP1P01033 SPTLC1P1-201ENST00000447199 261 ntBASIC18.54■□□□□ 0.56
TIMP1P01033 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC18.54■□□□□ 0.56
TIMP1P01033 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.54■□□□□ 0.56
TIMP1P01033 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
TIMP1P01033 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.54■□□□□ 0.56
TIMP1P01033 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.54■□□□□ 0.56
TIMP1P01033 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TIMP1P01033 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.54■□□□□ 0.56
TIMP1P01033 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TIMP1P01033 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TIMP1P01033 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TIMP1P01033 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
TIMP1P01033 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.54■□□□□ 0.56
TIMP1P01033 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TIMP1P01033 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TIMP1P01033 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TIMP1P01033 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TIMP1P01033 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TIMP1P01033 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
TIMP1P01033 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
TIMP1P01033 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TIMP1P01033 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TIMP1P01033 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TIMP1P01033 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC18.53■□□□□ 0.56
TIMP1P01033 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TIMP1P01033 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC18.53■□□□□ 0.56
TIMP1P01033 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.53■□□□□ 0.56
TIMP1P01033 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC18.53■□□□□ 0.56
TIMP1P01033 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC18.53■□□□□ 0.56
TIMP1P01033 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
TIMP1P01033 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TIMP1P01033 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TIMP1P01033 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TIMP1P01033 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.53■□□□□ 0.56
TIMP1P01033 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TIMP1P01033 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TIMP1P01033 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TIMP1P01033 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.53■□□□□ 0.56
TIMP1P01033 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TIMP1P01033 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
TIMP1P01033 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
TIMP1P01033 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TIMP1P01033 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.52■□□□□ 0.56
TIMP1P01033 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.52■□□□□ 0.56
TIMP1P01033 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
TIMP1P01033 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
TIMP1P01033 HCG4-201ENST00000418983 998 ntBASIC18.52■□□□□ 0.56
TIMP1P01033 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TIMP1P01033 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC18.52■□□□□ 0.56
TIMP1P01033 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.52■□□□□ 0.56
TIMP1P01033 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC18.52■□□□□ 0.56
TIMP1P01033 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC18.52■□□□□ 0.56
TIMP1P01033 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
TIMP1P01033 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC18.52■□□□□ 0.56
TIMP1P01033 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
TIMP1P01033 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TIMP1P01033 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
TIMP1P01033 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.55
TIMP1P01033 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.52■□□□□ 0.55
TIMP1P01033 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TIMP1P01033 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TIMP1P01033 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
TIMP1P01033 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.52■□□□□ 0.55
TIMP1P01033 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TIMP1P01033 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.52■□□□□ 0.55
TIMP1P01033 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TIMP1P01033 AC120498.9-201ENST00000339021 3867 ntBASIC18.51■□□□□ 0.55
TIMP1P01033 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.51■□□□□ 0.55
TIMP1P01033 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TIMP1P01033 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.51■□□□□ 0.55
TIMP1P01033 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TIMP1P01033 GRAMD4P3-201ENST00000621665 1669 ntBASIC18.51■□□□□ 0.55
TIMP1P01033 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TIMP1P01033 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TIMP1P01033 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TIMP1P01033 RNU1-129P-201ENST00000384064 167 ntBASIC18.51■□□□□ 0.55
TIMP1P01033 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
TIMP1P01033 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC18.51■□□□□ 0.55
TIMP1P01033 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC18.51■□□□□ 0.55
TIMP1P01033 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms