Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
ALDH1A1P00352 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC19.58■□□□□ 0.72
ALDH1A1P00352 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC19.58■□□□□ 0.72
ALDH1A1P00352 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC19.58■□□□□ 0.72
ALDH1A1P00352 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.58■□□□□ 0.72
ALDH1A1P00352 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ALDH1A1P00352 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
ALDH1A1P00352 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ALDH1A1P00352 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ALDH1A1P00352 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ALDH1A1P00352 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ALDH1A1P00352 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ALDH1A1P00352 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC19.57■□□□□ 0.72
ALDH1A1P00352 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC19.57■□□□□ 0.72
ALDH1A1P00352 RPS2P32-201ENST00000439199 892 ntBASIC19.57■□□□□ 0.72
ALDH1A1P00352 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC19.57■□□□□ 0.72
ALDH1A1P00352 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ALDH1A1P00352 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC19.57■□□□□ 0.72
ALDH1A1P00352 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ALDH1A1P00352 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC19.57■□□□□ 0.72
ALDH1A1P00352 MIR3909-201ENST00000579518 119 ntBASIC19.57■□□□□ 0.72
ALDH1A1P00352 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ALDH1A1P00352 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC19.57■□□□□ 0.72
ALDH1A1P00352 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC19.57■□□□□ 0.72
ALDH1A1P00352 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC19.57■□□□□ 0.72
ALDH1A1P00352 SPDYE12P-201ENST00000618416 771 ntBASIC19.57■□□□□ 0.72
ALDH1A1P00352 GPER1-207ENST00000619052 571 ntTSL 2 BASIC19.57■□□□□ 0.72
ALDH1A1P00352 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
ALDH1A1P00352 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ALDH1A1P00352 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ALDH1A1P00352 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ALDH1A1P00352 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
ALDH1A1P00352 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC19.56■□□□□ 0.72
ALDH1A1P00352 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ALDH1A1P00352 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
ALDH1A1P00352 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
ALDH1A1P00352 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
ALDH1A1P00352 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
ALDH1A1P00352 AL353732.1-201ENST00000569618 1459 ntBASIC19.56■□□□□ 0.72
ALDH1A1P00352 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.56■□□□□ 0.72
ALDH1A1P00352 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ALDH1A1P00352 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ALDH1A1P00352 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ALDH1A1P00352 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ALDH1A1P00352 AC245100.3-201ENST00000441281 285 ntBASIC19.56■□□□□ 0.72
ALDH1A1P00352 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC19.56■□□□□ 0.72
ALDH1A1P00352 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC19.56■□□□□ 0.72
ALDH1A1P00352 MTRF1LP2-201ENST00000506027 1122 ntBASIC19.56■□□□□ 0.72
ALDH1A1P00352 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC19.56■□□□□ 0.72
ALDH1A1P00352 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
ALDH1A1P00352 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC19.56■□□□□ 0.72
ALDH1A1P00352 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC19.56■□□□□ 0.72
ALDH1A1P00352 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC19.56■□□□□ 0.72
ALDH1A1P00352 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC19.56■□□□□ 0.72
ALDH1A1P00352 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC19.56■□□□□ 0.72
ALDH1A1P00352 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC19.56■□□□□ 0.72
ALDH1A1P00352 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC19.56■□□□□ 0.72
ALDH1A1P00352 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
ALDH1A1P00352 AC007967.4-201ENST00000614700 386 ntBASIC19.56■□□□□ 0.72
ALDH1A1P00352 AL138828.2-201ENST00000615812 383 ntBASIC19.56■□□□□ 0.72
ALDH1A1P00352 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
ALDH1A1P00352 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ALDH1A1P00352 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
ALDH1A1P00352 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.56■□□□□ 0.72
ALDH1A1P00352 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ALDH1A1P00352 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ALDH1A1P00352 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ALDH1A1P00352 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ALDH1A1P00352 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ALDH1A1P00352 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ALDH1A1P00352 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.55■□□□□ 0.72
ALDH1A1P00352 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ALDH1A1P00352 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ALDH1A1P00352 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ALDH1A1P00352 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ALDH1A1P00352 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ALDH1A1P00352 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC19.55■□□□□ 0.72
ALDH1A1P00352 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
ALDH1A1P00352 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC19.55■□□□□ 0.72
ALDH1A1P00352 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ALDH1A1P00352 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC19.55■□□□□ 0.72
ALDH1A1P00352 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC19.55■□□□□ 0.72
ALDH1A1P00352 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
ALDH1A1P00352 NKG7-205ENST00000600427 520 ntTSL 3 BASIC19.55■□□□□ 0.72
ALDH1A1P00352 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
ALDH1A1P00352 AL162274.1-201ENST00000617191 1098 ntBASIC19.55■□□□□ 0.72
ALDH1A1P00352 RAB34-223ENST00000636154 730 ntTSL 2 BASIC19.55■□□□□ 0.72
ALDH1A1P00352 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.55■□□□□ 0.72
ALDH1A1P00352 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ALDH1A1P00352 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ALDH1A1P00352 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ALDH1A1P00352 AC007541.1-201ENST00000570282 1469 ntBASIC19.54■□□□□ 0.72
ALDH1A1P00352 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
ALDH1A1P00352 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ALDH1A1P00352 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ALDH1A1P00352 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ALDH1A1P00352 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ALDH1A1P00352 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC19.54■□□□□ 0.72
ALDH1A1P00352 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
ALDH1A1P00352 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms