Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
RTN3O95197 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTN3O95197 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.28■□□□□ 0.52
RTN3O95197 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTN3O95197 AC097637.2-201ENST00000624096 1997 ntBASIC18.28■□□□□ 0.52
RTN3O95197 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
RTN3O95197 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
RTN3O95197 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RTN3O95197 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RTN3O95197 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTN3O95197 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.28■□□□□ 0.52
RTN3O95197 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTN3O95197 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTN3O95197 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTN3O95197 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.28■□□□□ 0.52
RTN3O95197 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RTN3O95197 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.28■□□□□ 0.52
RTN3O95197 AC073621.1-201ENST00000392730 636 ntBASIC18.28■□□□□ 0.52
RTN3O95197 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.28■□□□□ 0.52
RTN3O95197 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.28■□□□□ 0.52
RTN3O95197 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTN3O95197 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.28■□□□□ 0.52
RTN3O95197 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.28■□□□□ 0.52
RTN3O95197 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
RTN3O95197 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
RTN3O95197 AL139424.1-201ENST00000607572 797 ntBASIC18.28■□□□□ 0.52
RTN3O95197 AC005593.1-201ENST00000624894 515 ntBASIC18.28■□□□□ 0.52
RTN3O95197 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RTN3O95197 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.28■□□□□ 0.52
RTN3O95197 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RTN3O95197 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RTN3O95197 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTN3O95197 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.28■□□□□ 0.52
RTN3O95197 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTN3O95197 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTN3O95197 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.27■□□□□ 0.52
RTN3O95197 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
RTN3O95197 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RTN3O95197 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RTN3O95197 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTN3O95197 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18.27■□□□□ 0.52
RTN3O95197 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.27■□□□□ 0.52
RTN3O95197 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
RTN3O95197 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
RTN3O95197 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.27■□□□□ 0.52
RTN3O95197 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.27■□□□□ 0.52
RTN3O95197 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTN3O95197 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.52
RTN3O95197 AC012317.2-201ENST00000623305 2251 ntBASIC18.27■□□□□ 0.52
RTN3O95197 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.27■□□□□ 0.52
RTN3O95197 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTN3O95197 PMS2P1-201ENST00000431037 1228 ntBASIC18.27■□□□□ 0.52
RTN3O95197 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.27■□□□□ 0.52
RTN3O95197 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.27■□□□□ 0.52
RTN3O95197 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.27■□□□□ 0.52
RTN3O95197 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
RTN3O95197 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.27■□□□□ 0.52
RTN3O95197 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RTN3O95197 AC046185.3-201ENST00000623228 1824 ntBASIC18.27■□□□□ 0.52
RTN3O95197 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
RTN3O95197 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.27■□□□□ 0.52
RTN3O95197 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTN3O95197 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.51
RTN3O95197 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
RTN3O95197 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.27■□□□□ 0.51
RTN3O95197 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.27■□□□□ 0.51
RTN3O95197 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
RTN3O95197 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RTN3O95197 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
RTN3O95197 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RTN3O95197 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.27■□□□□ 0.51
RTN3O95197 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.26■□□□□ 0.51
RTN3O95197 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTN3O95197 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RTN3O95197 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTN3O95197 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTN3O95197 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.26■□□□□ 0.51
RTN3O95197 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RTN3O95197 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTN3O95197 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
RTN3O95197 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
RTN3O95197 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RTN3O95197 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
RTN3O95197 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTN3O95197 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RTN3O95197 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RTN3O95197 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.26■□□□□ 0.51
RTN3O95197 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RTN3O95197 RNA5SP415-201ENST00000517246 115 ntBASIC18.26■□□□□ 0.51
RTN3O95197 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.26■□□□□ 0.51
RTN3O95197 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.26■□□□□ 0.51
RTN3O95197 AC117500.6-201ENST00000624871 588 ntBASIC18.26■□□□□ 0.51
RTN3O95197 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.26■□□□□ 0.51
RTN3O95197 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.26■□□□□ 0.51
RTN3O95197 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTN3O95197 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.26■□□□□ 0.51
RTN3O95197 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
RTN3O95197 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTN3O95197 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
RTN3O95197 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms