Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFPL1O75677 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFPL1O75677 MIR662-201ENST00000384847 95 ntBASIC17.41■□□□□ 0.38
RFPL1O75677 AL845331.1-201ENST00000424978 1190 ntBASIC17.41■□□□□ 0.38
RFPL1O75677 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.41■□□□□ 0.38
RFPL1O75677 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RFPL1O75677 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.41■□□□□ 0.38
RFPL1O75677 AP003733.1-201ENST00000491725 852 ntBASIC17.41■□□□□ 0.38
RFPL1O75677 KRT8P26-201ENST00000534154 1276 ntBASIC17.41■□□□□ 0.38
RFPL1O75677 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.41■□□□□ 0.38
RFPL1O75677 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.41■□□□□ 0.38
RFPL1O75677 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
RFPL1O75677 MIR3180-1-201ENST00000580374 94 ntBASIC17.41■□□□□ 0.38
RFPL1O75677 MIR3180-3-201ENST00000584616 94 ntBASIC17.41■□□□□ 0.38
RFPL1O75677 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.41■□□□□ 0.38
RFPL1O75677 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.41■□□□□ 0.38
RFPL1O75677 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.41■□□□□ 0.38
RFPL1O75677 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.41■□□□□ 0.38
RFPL1O75677 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.41■□□□□ 0.38
RFPL1O75677 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.41■□□□□ 0.38
RFPL1O75677 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.41■□□□□ 0.38
RFPL1O75677 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.41■□□□□ 0.38
RFPL1O75677 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RFPL1O75677 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFPL1O75677 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RFPL1O75677 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RFPL1O75677 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFPL1O75677 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.41■□□□□ 0.38
RFPL1O75677 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFPL1O75677 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.41■□□□□ 0.38
RFPL1O75677 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFPL1O75677 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RFPL1O75677 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFPL1O75677 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.4■□□□□ 0.38
RFPL1O75677 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RFPL1O75677 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFPL1O75677 AC078925.2-201ENST00000624013 1973 ntBASIC17.4■□□□□ 0.38
RFPL1O75677 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.4■□□□□ 0.38
RFPL1O75677 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.4■□□□□ 0.38
RFPL1O75677 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.4■□□□□ 0.38
RFPL1O75677 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFPL1O75677 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.4■□□□□ 0.38
RFPL1O75677 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
RFPL1O75677 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.4■□□□□ 0.38
RFPL1O75677 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RFPL1O75677 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFPL1O75677 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.4■□□□□ 0.38
RFPL1O75677 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
RFPL1O75677 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RFPL1O75677 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFPL1O75677 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RFPL1O75677 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RFPL1O75677 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RFPL1O75677 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.4■□□□□ 0.38
RFPL1O75677 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFPL1O75677 AP002414.4-201ENST00000589764 1148 ntBASIC17.4■□□□□ 0.38
RFPL1O75677 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RFPL1O75677 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.4■□□□□ 0.38
RFPL1O75677 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RFPL1O75677 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFPL1O75677 PCDH8P1-201ENST00000428983 2773 ntBASIC17.4■□□□□ 0.38
RFPL1O75677 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RFPL1O75677 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFPL1O75677 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.4■□□□□ 0.38
RFPL1O75677 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
RFPL1O75677 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RFPL1O75677 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
RFPL1O75677 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFPL1O75677 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.38
RFPL1O75677 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFPL1O75677 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFPL1O75677 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.39■□□□□ 0.37
RFPL1O75677 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFPL1O75677 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
RFPL1O75677 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.39■□□□□ 0.37
RFPL1O75677 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFPL1O75677 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFPL1O75677 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RFPL1O75677 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFPL1O75677 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFPL1O75677 CHCHD2P8-201ENST00000429873 447 ntBASIC17.39■□□□□ 0.37
RFPL1O75677 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.39■□□□□ 0.37
RFPL1O75677 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.39■□□□□ 0.37
RFPL1O75677 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.39■□□□□ 0.37
RFPL1O75677 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.39■□□□□ 0.37
RFPL1O75677 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.39■□□□□ 0.37
RFPL1O75677 GPR32P1-201ENST00000601788 811 ntBASIC17.39■□□□□ 0.37
RFPL1O75677 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFPL1O75677 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RFPL1O75677 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFPL1O75677 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RFPL1O75677 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFPL1O75677 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
RFPL1O75677 AL603756.1-201ENST00000606511 2163 ntBASIC17.39■□□□□ 0.37
RFPL1O75677 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFPL1O75677 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RFPL1O75677 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RFPL1O75677 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
RFPL1O75677 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.39■□□□□ 0.37
RFPL1O75677 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms