Protein–RNA interactions for Protein: O75473

LGR5, Leucine-rich repeat-containing G-protein coupled receptor 5, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5O75473 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC19.17■□□□□ 0.66
LGR5O75473 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LGR5O75473 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
LGR5O75473 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC19.17■□□□□ 0.66
LGR5O75473 BCAR1-209ENST00000546196 1340 ntBASIC19.17■□□□□ 0.66
LGR5O75473 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
LGR5O75473 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.17■□□□□ 0.66
LGR5O75473 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
LGR5O75473 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LGR5O75473 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LGR5O75473 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LGR5O75473 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.16■□□□□ 0.66
LGR5O75473 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
LGR5O75473 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LGR5O75473 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.16■□□□□ 0.66
LGR5O75473 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LGR5O75473 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
LGR5O75473 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
LGR5O75473 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC19.16■□□□□ 0.66
LGR5O75473 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LGR5O75473 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
LGR5O75473 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC19.16■□□□□ 0.66
LGR5O75473 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.16■□□□□ 0.66
LGR5O75473 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC19.16■□□□□ 0.66
LGR5O75473 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LGR5O75473 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
LGR5O75473 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.16■□□□□ 0.66
LGR5O75473 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.16■□□□□ 0.66
LGR5O75473 AL078644.1-201ENST00000609881 752 ntBASIC19.16■□□□□ 0.66
LGR5O75473 ACTL9-202ENST00000612068 1252 ntBASIC19.16■□□□□ 0.66
LGR5O75473 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LGR5O75473 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.16■□□□□ 0.66
LGR5O75473 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
LGR5O75473 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LGR5O75473 AC025580.3-201ENST00000617932 1424 ntBASIC19.16■□□□□ 0.66
LGR5O75473 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.16■□□□□ 0.66
LGR5O75473 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LGR5O75473 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LGR5O75473 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.15■□□□□ 0.66
LGR5O75473 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
LGR5O75473 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LGR5O75473 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LGR5O75473 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LGR5O75473 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LGR5O75473 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LGR5O75473 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LGR5O75473 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.15■□□□□ 0.66
LGR5O75473 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.15■□□□□ 0.66
LGR5O75473 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.15■□□□□ 0.66
LGR5O75473 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LGR5O75473 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.15■□□□□ 0.66
LGR5O75473 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
LGR5O75473 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LGR5O75473 CD82-202ENST00000342935 967 ntTSL 5 BASIC19.15■□□□□ 0.66
LGR5O75473 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LGR5O75473 PON3-203ENST00000427422 894 ntTSL 3 BASIC19.15■□□□□ 0.66
LGR5O75473 CNN2P11-201ENST00000429351 262 ntBASIC19.15■□□□□ 0.66
LGR5O75473 CYMP-203ENST00000474680 1263 ntBASIC19.15■□□□□ 0.66
LGR5O75473 RFPL4AP1-201ENST00000530883 850 ntBASIC19.15■□□□□ 0.66
LGR5O75473 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
LGR5O75473 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
LGR5O75473 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LGR5O75473 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LGR5O75473 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.15■□□□□ 0.66
LGR5O75473 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
LGR5O75473 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LGR5O75473 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.15■□□□□ 0.66
LGR5O75473 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LGR5O75473 ELL2P1-201ENST00000413990 1906 ntBASIC19.14■□□□□ 0.65
LGR5O75473 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LGR5O75473 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LGR5O75473 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LGR5O75473 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LGR5O75473 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
LGR5O75473 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.14■□□□□ 0.65
LGR5O75473 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
LGR5O75473 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LGR5O75473 AC023141.13-201ENST00000604991 943 ntBASIC19.14■□□□□ 0.65
LGR5O75473 AC007064.4-201ENST00000637740 555 ntBASIC19.14■□□□□ 0.65
LGR5O75473 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC19.14■□□□□ 0.65
LGR5O75473 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.14■□□□□ 0.65
LGR5O75473 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LGR5O75473 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LGR5O75473 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
LGR5O75473 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
LGR5O75473 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LGR5O75473 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
LGR5O75473 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.13■□□□□ 0.65
LGR5O75473 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
LGR5O75473 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LGR5O75473 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LGR5O75473 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LGR5O75473 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LGR5O75473 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
LGR5O75473 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
LGR5O75473 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
LGR5O75473 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LGR5O75473 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC19.13■□□□□ 0.65
LGR5O75473 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC19.13■□□□□ 0.65
LGR5O75473 CEND1P1-201ENST00000451006 455 ntBASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms