Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PLOD3O60568 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PLOD3O60568 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.37■□□□□ 0.21
PLOD3O60568 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
PLOD3O60568 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
PLOD3O60568 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PLOD3O60568 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PLOD3O60568 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PLOD3O60568 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PLOD3O60568 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
PLOD3O60568 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
PLOD3O60568 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PLOD3O60568 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
PLOD3O60568 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PLOD3O60568 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.37■□□□□ 0.21
PLOD3O60568 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PLOD3O60568 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.37■□□□□ 0.21
PLOD3O60568 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.37■□□□□ 0.21
PLOD3O60568 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
PLOD3O60568 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.37■□□□□ 0.21
PLOD3O60568 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PLOD3O60568 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PLOD3O60568 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
PLOD3O60568 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PLOD3O60568 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PLOD3O60568 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PLOD3O60568 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PLOD3O60568 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
PLOD3O60568 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
PLOD3O60568 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PLOD3O60568 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PLOD3O60568 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PLOD3O60568 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
PLOD3O60568 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PLOD3O60568 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PLOD3O60568 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.36■□□□□ 0.21
PLOD3O60568 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.36■□□□□ 0.21
PLOD3O60568 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PLOD3O60568 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PLOD3O60568 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PLOD3O60568 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PLOD3O60568 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PLOD3O60568 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PLOD3O60568 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PLOD3O60568 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
PLOD3O60568 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PLOD3O60568 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PLOD3O60568 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PLOD3O60568 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
PLOD3O60568 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PLOD3O60568 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PLOD3O60568 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.36■□□□□ 0.21
PLOD3O60568 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PLOD3O60568 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.36■□□□□ 0.21
PLOD3O60568 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.36■□□□□ 0.21
PLOD3O60568 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.36■□□□□ 0.21
PLOD3O60568 STK25P1-201ENST00000585406 838 ntBASIC16.36■□□□□ 0.21
PLOD3O60568 AC099336.1-202ENST00000602961 463 ntBASIC16.36■□□□□ 0.21
PLOD3O60568 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.36■□□□□ 0.21
PLOD3O60568 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PLOD3O60568 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.36■□□□□ 0.21
PLOD3O60568 AD001527.2-201ENST00000622994 785 ntBASIC16.36■□□□□ 0.21
PLOD3O60568 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.36■□□□□ 0.21
PLOD3O60568 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.36■□□□□ 0.21
PLOD3O60568 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PLOD3O60568 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PLOD3O60568 AL023806.1-201ENST00000603994 1649 ntBASIC16.36■□□□□ 0.21
PLOD3O60568 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.36■□□□□ 0.21
PLOD3O60568 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PLOD3O60568 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PLOD3O60568 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PLOD3O60568 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PLOD3O60568 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.36■□□□□ 0.21
PLOD3O60568 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
PLOD3O60568 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.35■□□□□ 0.21
PLOD3O60568 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
PLOD3O60568 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PLOD3O60568 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PLOD3O60568 AC008894.3-201ENST00000624324 3103 ntBASIC16.35■□□□□ 0.21
PLOD3O60568 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PLOD3O60568 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PLOD3O60568 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PLOD3O60568 CROCCP2-202ENST00000412962 2773 ntBASIC16.35■□□□□ 0.21
PLOD3O60568 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
PLOD3O60568 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.35■□□□□ 0.21
PLOD3O60568 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.35■□□□□ 0.21
PLOD3O60568 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
PLOD3O60568 AL645608.8-201ENST00000606034 2086 ntBASIC16.35■□□□□ 0.21
PLOD3O60568 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PLOD3O60568 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PLOD3O60568 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
PLOD3O60568 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.35■□□□□ 0.21
PLOD3O60568 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
PLOD3O60568 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.35■□□□□ 0.21
PLOD3O60568 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.35■□□□□ 0.21
PLOD3O60568 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.35■□□□□ 0.21
PLOD3O60568 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PLOD3O60568 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.35■□□□□ 0.21
PLOD3O60568 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PLOD3O60568 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms