Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.58■□□□□ 0.24
LCMT2O60294 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.58■□□□□ 0.24
LCMT2O60294 AC148477.8-201ENST00000624298 468 ntBASIC16.58■□□□□ 0.24
LCMT2O60294 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
LCMT2O60294 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.58■□□□□ 0.24
LCMT2O60294 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LCMT2O60294 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LCMT2O60294 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.58■□□□□ 0.24
LCMT2O60294 AC093525.9-201ENST00000624961 1746 ntBASIC16.58■□□□□ 0.24
LCMT2O60294 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LCMT2O60294 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LCMT2O60294 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
LCMT2O60294 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.58■□□□□ 0.24
LCMT2O60294 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LCMT2O60294 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LCMT2O60294 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
LCMT2O60294 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LCMT2O60294 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LCMT2O60294 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
LCMT2O60294 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.57■□□□□ 0.24
LCMT2O60294 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
LCMT2O60294 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
LCMT2O60294 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
LCMT2O60294 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.57■□□□□ 0.24
LCMT2O60294 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LCMT2O60294 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.57■□□□□ 0.24
LCMT2O60294 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LCMT2O60294 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
LCMT2O60294 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LCMT2O60294 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
LCMT2O60294 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
LCMT2O60294 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LCMT2O60294 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.57■□□□□ 0.24
LCMT2O60294 HNRNPDP1-201ENST00000439535 754 ntBASIC16.57■□□□□ 0.24
LCMT2O60294 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.57■□□□□ 0.24
LCMT2O60294 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.57■□□□□ 0.24
LCMT2O60294 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.57■□□□□ 0.24
LCMT2O60294 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.57■□□□□ 0.24
LCMT2O60294 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.57■□□□□ 0.24
LCMT2O60294 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.57■□□□□ 0.24
LCMT2O60294 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.57■□□□□ 0.24
LCMT2O60294 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
LCMT2O60294 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
LCMT2O60294 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LCMT2O60294 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.57■□□□□ 0.24
LCMT2O60294 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
LCMT2O60294 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
LCMT2O60294 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
LCMT2O60294 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LCMT2O60294 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LCMT2O60294 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LCMT2O60294 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LCMT2O60294 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LCMT2O60294 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
LCMT2O60294 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LCMT2O60294 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LCMT2O60294 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LCMT2O60294 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LCMT2O60294 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LCMT2O60294 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LCMT2O60294 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
LCMT2O60294 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
LCMT2O60294 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LCMT2O60294 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.56■□□□□ 0.24
LCMT2O60294 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LCMT2O60294 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
LCMT2O60294 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LCMT2O60294 ACTG1P4-201ENST00000425123 1122 ntBASIC16.56■□□□□ 0.24
LCMT2O60294 RPS2P1-201ENST00000434010 821 ntBASIC16.56■□□□□ 0.24
LCMT2O60294 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
LCMT2O60294 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.56■□□□□ 0.24
LCMT2O60294 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LCMT2O60294 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
LCMT2O60294 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.56■□□□□ 0.24
LCMT2O60294 AP002469.2-201ENST00000531724 424 ntBASIC16.56■□□□□ 0.24
LCMT2O60294 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.56■□□□□ 0.24
LCMT2O60294 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
LCMT2O60294 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
LCMT2O60294 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.56■□□□□ 0.24
LCMT2O60294 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.56■□□□□ 0.24
LCMT2O60294 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
LCMT2O60294 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LCMT2O60294 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LCMT2O60294 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LCMT2O60294 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LCMT2O60294 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LCMT2O60294 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.56■□□□□ 0.24
LCMT2O60294 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LCMT2O60294 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LCMT2O60294 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
LCMT2O60294 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LCMT2O60294 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LCMT2O60294 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.55■□□□□ 0.24
LCMT2O60294 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LCMT2O60294 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.55■□□□□ 0.24
LCMT2O60294 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
LCMT2O60294 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LCMT2O60294 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LCMT2O60294 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.55■□□□□ 0.24
LCMT2O60294 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms