Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
IDH3BO43837 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
IDH3BO43837 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
IDH3BO43837 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.99■□□□□ 0.15
IDH3BO43837 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC15.99■□□□□ 0.15
IDH3BO43837 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
IDH3BO43837 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
IDH3BO43837 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
IDH3BO43837 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
IDH3BO43837 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
IDH3BO43837 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
IDH3BO43837 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
IDH3BO43837 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
IDH3BO43837 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
IDH3BO43837 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
IDH3BO43837 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
IDH3BO43837 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
IDH3BO43837 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
IDH3BO43837 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
IDH3BO43837 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.98■□□□□ 0.15
IDH3BO43837 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
IDH3BO43837 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
IDH3BO43837 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
IDH3BO43837 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
IDH3BO43837 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
IDH3BO43837 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
IDH3BO43837 AL391807.1-203ENST00000604392 2365 ntBASIC15.98■□□□□ 0.15
IDH3BO43837 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.98■□□□□ 0.15
IDH3BO43837 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
IDH3BO43837 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
IDH3BO43837 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.98■□□□□ 0.15
IDH3BO43837 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
IDH3BO43837 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
IDH3BO43837 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
IDH3BO43837 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
IDH3BO43837 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
IDH3BO43837 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.98■□□□□ 0.15
IDH3BO43837 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
IDH3BO43837 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC15.98■□□□□ 0.15
IDH3BO43837 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.98■□□□□ 0.15
IDH3BO43837 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
IDH3BO43837 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
IDH3BO43837 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
IDH3BO43837 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC15.98■□□□□ 0.15
IDH3BO43837 TEN1-204ENST00000588202 862 ntTSL 3 BASIC15.98■□□□□ 0.15
IDH3BO43837 AL136038.4-201ENST00000603606 1261 ntBASIC15.98■□□□□ 0.15
IDH3BO43837 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
IDH3BO43837 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
IDH3BO43837 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.98■□□□□ 0.15
IDH3BO43837 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
IDH3BO43837 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.98■□□□□ 0.15
IDH3BO43837 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
IDH3BO43837 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
IDH3BO43837 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
IDH3BO43837 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
IDH3BO43837 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
IDH3BO43837 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
IDH3BO43837 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
IDH3BO43837 REXO1L11P-201ENST00000620964 1927 ntBASIC15.98■□□□□ 0.15
IDH3BO43837 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.98■□□□□ 0.15
IDH3BO43837 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.97■□□□□ 0.15
IDH3BO43837 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
IDH3BO43837 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.97■□□□□ 0.15
IDH3BO43837 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
IDH3BO43837 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
IDH3BO43837 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
IDH3BO43837 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
IDH3BO43837 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
IDH3BO43837 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
IDH3BO43837 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
IDH3BO43837 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
IDH3BO43837 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
IDH3BO43837 KRT18P48-201ENST00000434763 852 ntBASIC15.97■□□□□ 0.15
IDH3BO43837 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC15.97■□□□□ 0.15
IDH3BO43837 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
IDH3BO43837 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
IDH3BO43837 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
IDH3BO43837 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.97■□□□□ 0.15
IDH3BO43837 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
IDH3BO43837 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.97■□□□□ 0.15
IDH3BO43837 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
IDH3BO43837 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
IDH3BO43837 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
IDH3BO43837 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
IDH3BO43837 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
IDH3BO43837 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
IDH3BO43837 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
IDH3BO43837 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
IDH3BO43837 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
IDH3BO43837 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
IDH3BO43837 AC005052.1-201ENST00000625181 2492 ntBASIC15.96■□□□□ 0.15
IDH3BO43837 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.96■□□□□ 0.15
IDH3BO43837 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
IDH3BO43837 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
IDH3BO43837 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
IDH3BO43837 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
IDH3BO43837 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
IDH3BO43837 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
IDH3BO43837 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.96■□□□□ 0.15
IDH3BO43837 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms