Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
E2F3O00716 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
E2F3O00716 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
E2F3O00716 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
E2F3O00716 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
E2F3O00716 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.92■□□□□ 0.3
E2F3O00716 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
E2F3O00716 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.92■□□□□ 0.3
E2F3O00716 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.92■□□□□ 0.3
E2F3O00716 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
E2F3O00716 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.91■□□□□ 0.3
E2F3O00716 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
E2F3O00716 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
E2F3O00716 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
E2F3O00716 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.91■□□□□ 0.3
E2F3O00716 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
E2F3O00716 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.91■□□□□ 0.3
E2F3O00716 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
E2F3O00716 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.91■□□□□ 0.3
E2F3O00716 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
E2F3O00716 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
E2F3O00716 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
E2F3O00716 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
E2F3O00716 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
E2F3O00716 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.91■□□□□ 0.3
E2F3O00716 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
E2F3O00716 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.91■□□□□ 0.3
E2F3O00716 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.91■□□□□ 0.3
E2F3O00716 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
E2F3O00716 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
E2F3O00716 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
E2F3O00716 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
E2F3O00716 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.91■□□□□ 0.3
E2F3O00716 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
E2F3O00716 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
E2F3O00716 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.91■□□□□ 0.3
E2F3O00716 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
E2F3O00716 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
E2F3O00716 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.91■□□□□ 0.3
E2F3O00716 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.91■□□□□ 0.3
E2F3O00716 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.91■□□□□ 0.3
E2F3O00716 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
E2F3O00716 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
E2F3O00716 AC233702.3-201ENST00000578656 1387 ntBASIC16.9■□□□□ 0.3
E2F3O00716 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.9■□□□□ 0.3
E2F3O00716 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.9■□□□□ 0.3
E2F3O00716 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
E2F3O00716 AGGF1P2-201ENST00000426656 2106 ntBASIC16.9■□□□□ 0.3
E2F3O00716 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.9■□□□□ 0.3
E2F3O00716 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
E2F3O00716 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
E2F3O00716 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
E2F3O00716 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
E2F3O00716 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.9■□□□□ 0.3
E2F3O00716 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.9■□□□□ 0.3
E2F3O00716 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.9■□□□□ 0.3
E2F3O00716 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.9■□□□□ 0.3
E2F3O00716 TSPY19P-201ENST00000418461 509 ntBASIC16.9■□□□□ 0.3
E2F3O00716 TSPY18P-201ENST00000441642 509 ntBASIC16.9■□□□□ 0.3
E2F3O00716 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.9■□□□□ 0.3
E2F3O00716 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.9■□□□□ 0.3
E2F3O00716 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.9■□□□□ 0.3
E2F3O00716 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.9■□□□□ 0.3
E2F3O00716 TPSP2-201ENST00000561760 610 ntBASIC16.9■□□□□ 0.3
E2F3O00716 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.9■□□□□ 0.3
E2F3O00716 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.9■□□□□ 0.3
E2F3O00716 AL732292.2-201ENST00000609649 430 ntBASIC16.9■□□□□ 0.3
E2F3O00716 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
E2F3O00716 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
E2F3O00716 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
E2F3O00716 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.9■□□□□ 0.3
E2F3O00716 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.9■□□□□ 0.3
E2F3O00716 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
E2F3O00716 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
E2F3O00716 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.9■□□□□ 0.3
E2F3O00716 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
E2F3O00716 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.9■□□□□ 0.3
E2F3O00716 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
E2F3O00716 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
E2F3O00716 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
E2F3O00716 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.9■□□□□ 0.3
E2F3O00716 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
E2F3O00716 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.9■□□□□ 0.3
E2F3O00716 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
E2F3O00716 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
E2F3O00716 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.9■□□□□ 0.3
E2F3O00716 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
E2F3O00716 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
E2F3O00716 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.89■□□□□ 0.3
E2F3O00716 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.89■□□□□ 0.3
E2F3O00716 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
E2F3O00716 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
E2F3O00716 AC132938.5-201ENST00000624980 1813 ntBASIC16.89■□□□□ 0.29
E2F3O00716 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.89■□□□□ 0.29
E2F3O00716 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
E2F3O00716 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
E2F3O00716 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.89■□□□□ 0.29
E2F3O00716 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
E2F3O00716 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
E2F3O00716 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms