Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.26■□□□□ 0.51
SOX1O00570 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SOX1O00570 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC18.26■□□□□ 0.51
SOX1O00570 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC18.26■□□□□ 0.51
SOX1O00570 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC18.26■□□□□ 0.51
SOX1O00570 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18.26■□□□□ 0.51
SOX1O00570 RAB34-223ENST00000636154 730 ntTSL 2 BASIC18.26■□□□□ 0.51
SOX1O00570 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SOX1O00570 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.26■□□□□ 0.51
SOX1O00570 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SOX1O00570 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SOX1O00570 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SOX1O00570 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.26■□□□□ 0.51
SOX1O00570 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
SOX1O00570 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SOX1O00570 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.26■□□□□ 0.51
SOX1O00570 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SOX1O00570 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SOX1O00570 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SOX1O00570 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SOX1O00570 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SOX1O00570 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SOX1O00570 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
SOX1O00570 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
SOX1O00570 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SOX1O00570 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SOX1O00570 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SOX1O00570 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SOX1O00570 SPDYE19P-201ENST00000338590 713 ntBASIC18.25■□□□□ 0.51
SOX1O00570 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC18.25■□□□□ 0.51
SOX1O00570 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC18.25■□□□□ 0.51
SOX1O00570 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.25■□□□□ 0.51
SOX1O00570 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC18.25■□□□□ 0.51
SOX1O00570 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.25■□□□□ 0.51
SOX1O00570 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC18.25■□□□□ 0.51
SOX1O00570 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC18.25■□□□□ 0.51
SOX1O00570 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
SOX1O00570 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SOX1O00570 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
SOX1O00570 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SOX1O00570 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.25■□□□□ 0.51
SOX1O00570 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.25■□□□□ 0.51
SOX1O00570 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SOX1O00570 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SOX1O00570 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
SOX1O00570 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SOX1O00570 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
SOX1O00570 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
SOX1O00570 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
SOX1O00570 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SOX1O00570 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SOX1O00570 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
SOX1O00570 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SOX1O00570 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.24■□□□□ 0.51
SOX1O00570 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SOX1O00570 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.24■□□□□ 0.51
SOX1O00570 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SOX1O00570 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC18.24■□□□□ 0.51
SOX1O00570 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
SOX1O00570 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SOX1O00570 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC18.24■□□□□ 0.51
SOX1O00570 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SOX1O00570 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC18.24■□□□□ 0.51
SOX1O00570 AC104989.1-201ENST00000519711 778 ntBASIC18.24■□□□□ 0.51
SOX1O00570 RARRES2P9-201ENST00000565168 469 ntBASIC18.24■□□□□ 0.51
SOX1O00570 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC18.24■□□□□ 0.51
SOX1O00570 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SOX1O00570 TECR-220ENST00000600083 1204 ntTSL 2 BASIC18.24■□□□□ 0.51
SOX1O00570 WNT11-204ENST00000621122 789 ntTSL 5 BASIC18.24■□□□□ 0.51
SOX1O00570 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SOX1O00570 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
SOX1O00570 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.24■□□□□ 0.51
SOX1O00570 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SOX1O00570 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SOX1O00570 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SOX1O00570 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.23■□□□□ 0.51
SOX1O00570 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SOX1O00570 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
SOX1O00570 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SOX1O00570 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SOX1O00570 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC18.23■□□□□ 0.51
SOX1O00570 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
SOX1O00570 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SOX1O00570 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC18.23■□□□□ 0.51
SOX1O00570 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC18.23■□□□□ 0.51
SOX1O00570 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18.23■□□□□ 0.51
SOX1O00570 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.23■□□□□ 0.51
SOX1O00570 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SOX1O00570 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC18.23■□□□□ 0.51
SOX1O00570 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC18.23■□□□□ 0.51
SOX1O00570 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.23■□□□□ 0.51
SOX1O00570 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC18.23■□□□□ 0.51
SOX1O00570 PPA1-206ENST00000625364 644 ntTSL 5 BASIC18.23■□□□□ 0.51
SOX1O00570 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
SOX1O00570 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SOX1O00570 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
SOX1O00570 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
SOX1O00570 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SOX1O00570 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SOX1O00570 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms