Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.7■□□□□ 0.26
SLC28A1O00337 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC28A1O00337 AL353593.2-201ENST00000602529 1483 ntBASIC16.7■□□□□ 0.26
SLC28A1O00337 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.7■□□□□ 0.26
SLC28A1O00337 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC28A1O00337 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.7■□□□□ 0.26
SLC28A1O00337 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.7■□□□□ 0.26
SLC28A1O00337 RCN1P1-201ENST00000400413 996 ntBASIC16.7■□□□□ 0.26
SLC28A1O00337 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SLC28A1O00337 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.7■□□□□ 0.26
SLC28A1O00337 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SLC28A1O00337 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.7■□□□□ 0.26
SLC28A1O00337 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.7■□□□□ 0.26
SLC28A1O00337 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC28A1O00337 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.7■□□□□ 0.26
SLC28A1O00337 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC28A1O00337 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.7■□□□□ 0.26
SLC28A1O00337 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC28A1O00337 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SLC28A1O00337 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC28A1O00337 AL118508.1-201ENST00000613502 2345 ntBASIC16.7■□□□□ 0.26
SLC28A1O00337 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC28A1O00337 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SLC28A1O00337 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC28A1O00337 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC28A1O00337 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.7■□□□□ 0.26
SLC28A1O00337 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SLC28A1O00337 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.7■□□□□ 0.26
SLC28A1O00337 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.7■□□□□ 0.26
SLC28A1O00337 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC28A1O00337 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.7■□□□□ 0.26
SLC28A1O00337 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.7■□□□□ 0.26
SLC28A1O00337 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.69■□□□□ 0.26
SLC28A1O00337 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SLC28A1O00337 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.69■□□□□ 0.26
SLC28A1O00337 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.69■□□□□ 0.26
SLC28A1O00337 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC28A1O00337 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC28A1O00337 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC28A1O00337 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC28A1O00337 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.69■□□□□ 0.26
SLC28A1O00337 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.69■□□□□ 0.26
SLC28A1O00337 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SLC28A1O00337 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC28A1O00337 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC28A1O00337 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.69■□□□□ 0.26
SLC28A1O00337 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SLC28A1O00337 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.69■□□□□ 0.26
SLC28A1O00337 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.69■□□□□ 0.26
SLC28A1O00337 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.69■□□□□ 0.26
SLC28A1O00337 STK19B-204ENST00000512515 211 ntBASIC16.69■□□□□ 0.26
SLC28A1O00337 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.69■□□□□ 0.26
SLC28A1O00337 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SLC28A1O00337 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.69■□□□□ 0.26
SLC28A1O00337 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.69■□□□□ 0.26
SLC28A1O00337 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC28A1O00337 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.69■□□□□ 0.26
SLC28A1O00337 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.69■□□□□ 0.26
SLC28A1O00337 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
SLC28A1O00337 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.69■□□□□ 0.26
SLC28A1O00337 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC28A1O00337 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SLC28A1O00337 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC28A1O00337 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC28A1O00337 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SLC28A1O00337 EGFEM1P-202ENST00000431685 1563 ntBASIC16.68■□□□□ 0.26
SLC28A1O00337 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC28A1O00337 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.68■□□□□ 0.26
SLC28A1O00337 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.68■□□□□ 0.26
SLC28A1O00337 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.68■□□□□ 0.26
SLC28A1O00337 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.68■□□□□ 0.26
SLC28A1O00337 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SLC28A1O00337 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SLC28A1O00337 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC28A1O00337 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC28A1O00337 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SLC28A1O00337 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC28A1O00337 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SLC28A1O00337 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SLC28A1O00337 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SLC28A1O00337 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC28A1O00337 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.68■□□□□ 0.26
SLC28A1O00337 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC28A1O00337 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC28A1O00337 TMPOP1-202ENST00000424642 1267 ntBASIC16.68■□□□□ 0.26
SLC28A1O00337 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SLC28A1O00337 BX276092.5-203ENST00000456199 560 ntBASIC16.68■□□□□ 0.26
SLC28A1O00337 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.68■□□□□ 0.26
SLC28A1O00337 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SLC28A1O00337 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.68■□□□□ 0.26
SLC28A1O00337 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
SLC28A1O00337 AL121672.3-201ENST00000608644 468 ntBASIC16.68■□□□□ 0.26
SLC28A1O00337 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SLC28A1O00337 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
SLC28A1O00337 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.68■□□□□ 0.26
SLC28A1O00337 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC28A1O00337 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC28A1O00337 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC28A1O00337 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SLC28A1O00337 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms