Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NACAE9PAV3 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
NACAE9PAV3 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NACAE9PAV3 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NACAE9PAV3 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NACAE9PAV3 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NACAE9PAV3 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NACAE9PAV3 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
NACAE9PAV3 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NACAE9PAV3 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC12.72□□□□□ -0.37
NACAE9PAV3 F11R-206ENST00000621309 4770 ntTSL 5 BASIC12.72□□□□□ -0.37
NACAE9PAV3 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC12.72□□□□□ -0.37
NACAE9PAV3 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
NACAE9PAV3 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
NACAE9PAV3 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
NACAE9PAV3 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NACAE9PAV3 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
NACAE9PAV3 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
NACAE9PAV3 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
NACAE9PAV3 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC12.71□□□□□ -0.37
NACAE9PAV3 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NACAE9PAV3 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
NACAE9PAV3 PPIH-202ENST00000372549 327 ntTSL 3 BASIC12.71□□□□□ -0.37
NACAE9PAV3 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
NACAE9PAV3 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC12.71□□□□□ -0.37
NACAE9PAV3 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC12.71□□□□□ -0.37
NACAE9PAV3 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
NACAE9PAV3 AL732292.2-201ENST00000609649 430 ntBASIC12.71□□□□□ -0.37
NACAE9PAV3 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC12.71□□□□□ -0.37
NACAE9PAV3 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NACAE9PAV3 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
NACAE9PAV3 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NACAE9PAV3 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NACAE9PAV3 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC12.71□□□□□ -0.37
NACAE9PAV3 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC12.71□□□□□ -0.37
NACAE9PAV3 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
NACAE9PAV3 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NACAE9PAV3 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NACAE9PAV3 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NACAE9PAV3 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC12.71□□□□□ -0.37
NACAE9PAV3 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
NACAE9PAV3 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NACAE9PAV3 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NACAE9PAV3 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC12.71□□□□□ -0.37
NACAE9PAV3 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
NACAE9PAV3 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC12.71□□□□□ -0.38
NACAE9PAV3 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
NACAE9PAV3 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.38
NACAE9PAV3 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC12.71□□□□□ -0.38
NACAE9PAV3 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
NACAE9PAV3 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.38
NACAE9PAV3 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
NACAE9PAV3 AC099398.1-201ENST00000567919 2776 ntBASIC12.71□□□□□ -0.38
NACAE9PAV3 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
NACAE9PAV3 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
NACAE9PAV3 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
NACAE9PAV3 KRT18P65-201ENST00000439811 1286 ntBASIC12.71□□□□□ -0.38
NACAE9PAV3 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC12.71□□□□□ -0.38
NACAE9PAV3 AC112698.1-201ENST00000510299 916 ntBASIC12.71□□□□□ -0.38
NACAE9PAV3 DUTP2-201ENST00000519164 463 ntBASIC12.71□□□□□ -0.38
NACAE9PAV3 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC12.71□□□□□ -0.38
NACAE9PAV3 AC005336.2-201ENST00000593183 939 ntBASIC12.71□□□□□ -0.38
NACAE9PAV3 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
NACAE9PAV3 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC12.71□□□□□ -0.38
NACAE9PAV3 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC12.71□□□□□ -0.38
NACAE9PAV3 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC12.71□□□□□ -0.38
NACAE9PAV3 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC12.71□□□□□ -0.38
NACAE9PAV3 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
NACAE9PAV3 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
NACAE9PAV3 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC12.71□□□□□ -0.38
NACAE9PAV3 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC12.71□□□□□ -0.38
NACAE9PAV3 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
NACAE9PAV3 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
NACAE9PAV3 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
NACAE9PAV3 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
NACAE9PAV3 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC12.71□□□□□ -0.38
NACAE9PAV3 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
NACAE9PAV3 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC12.7□□□□□ -0.38
NACAE9PAV3 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NACAE9PAV3 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NACAE9PAV3 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC12.7□□□□□ -0.38
NACAE9PAV3 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
NACAE9PAV3 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
NACAE9PAV3 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
NACAE9PAV3 HARS-201ENST00000307633 1780 ntTSL 2 BASIC12.7□□□□□ -0.38
NACAE9PAV3 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC12.7□□□□□ -0.38
NACAE9PAV3 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
NACAE9PAV3 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NACAE9PAV3 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NACAE9PAV3 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
NACAE9PAV3 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC12.7□□□□□ -0.38
NACAE9PAV3 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NACAE9PAV3 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC12.7□□□□□ -0.38
NACAE9PAV3 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC12.7□□□□□ -0.38
NACAE9PAV3 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC12.7□□□□□ -0.38
NACAE9PAV3 PP7080-204ENST00000510714 601 ntTSL 3 BASIC12.7□□□□□ -0.38
NACAE9PAV3 MIR3652-201ENST00000579335 131 ntBASIC12.7□□□□□ -0.38
NACAE9PAV3 LITAF-220ENST00000620789 692 ntTSL 5 BASIC12.7□□□□□ -0.38
NACAE9PAV3 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
NACAE9PAV3 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms