Protein–RNA interactions for Protein: C9JVI0

USP17L11, Ubiquitin carboxyl-terminal hydrolase 17-like protein 11, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L11C9JVI0 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP17L11C9JVI0 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP17L11C9JVI0 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP17L11C9JVI0 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP17L11C9JVI0 NEK7-201ENST00000367383 586 ntTSL 2 BASIC20.04■□□□□ 0.8
USP17L11C9JVI0 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
USP17L11C9JVI0 NABP1-203ENST00000409510 843 ntTSL 5 BASIC20.04■□□□□ 0.8
USP17L11C9JVI0 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC20.04■□□□□ 0.8
USP17L11C9JVI0 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC20.04■□□□□ 0.8
USP17L11C9JVI0 AL645939.2-201ENST00000427340 991 ntBASIC20.04■□□□□ 0.8
USP17L11C9JVI0 CYMP-203ENST00000474680 1263 ntBASIC20.04■□□□□ 0.8
USP17L11C9JVI0 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC20.04■□□□□ 0.8
USP17L11C9JVI0 CYB561-216ENST00000582297 897 ntTSL 3 BASIC20.04■□□□□ 0.8
USP17L11C9JVI0 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC20.04■□□□□ 0.8
USP17L11C9JVI0 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC20.04■□□□□ 0.8
USP17L11C9JVI0 LINC00304-203ENST00000565008 1864 ntBASIC20.04■□□□□ 0.8
USP17L11C9JVI0 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
USP17L11C9JVI0 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC20.04■□□□□ 0.8
USP17L11C9JVI0 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC20.04■□□□□ 0.8
USP17L11C9JVI0 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC20.04■□□□□ 0.8
USP17L11C9JVI0 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
USP17L11C9JVI0 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP17L11C9JVI0 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
USP17L11C9JVI0 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
USP17L11C9JVI0 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
USP17L11C9JVI0 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP17L11C9JVI0 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP17L11C9JVI0 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP17L11C9JVI0 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC20.03■□□□□ 0.8
USP17L11C9JVI0 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP17L11C9JVI0 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
USP17L11C9JVI0 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC20.03■□□□□ 0.8
USP17L11C9JVI0 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC20.03■□□□□ 0.8
USP17L11C9JVI0 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP17L11C9JVI0 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC20.03■□□□□ 0.8
USP17L11C9JVI0 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
USP17L11C9JVI0 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP17L11C9JVI0 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC20.03■□□□□ 0.8
USP17L11C9JVI0 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC20.03■□□□□ 0.8
USP17L11C9JVI0 METTL23-205ENST00000588302 925 ntTSL 5 BASIC20.03■□□□□ 0.8
USP17L11C9JVI0 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC20.03■□□□□ 0.8
USP17L11C9JVI0 AC091812.2-201ENST00000619081 385 ntBASIC20.03■□□□□ 0.8
USP17L11C9JVI0 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP17L11C9JVI0 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC20.03■□□□□ 0.8
USP17L11C9JVI0 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
USP17L11C9JVI0 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC20.03■□□□□ 0.8
USP17L11C9JVI0 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
USP17L11C9JVI0 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
USP17L11C9JVI0 AC134043.2-201ENST00000624206 2238 ntBASIC20.03■□□□□ 0.8
USP17L11C9JVI0 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP17L11C9JVI0 AL135999.2-201ENST00000622438 1686 ntBASIC20.03■□□□□ 0.8
USP17L11C9JVI0 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC20.03■□□□□ 0.8
USP17L11C9JVI0 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP17L11C9JVI0 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC20.03■□□□□ 0.8
USP17L11C9JVI0 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC20.03■□□□□ 0.8
USP17L11C9JVI0 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
USP17L11C9JVI0 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC20.02■□□□□ 0.8
USP17L11C9JVI0 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP17L11C9JVI0 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
USP17L11C9JVI0 AC046185.3-201ENST00000623228 1824 ntBASIC20.02■□□□□ 0.8
USP17L11C9JVI0 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC20.02■□□□□ 0.8
USP17L11C9JVI0 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
USP17L11C9JVI0 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.02■□□□□ 0.8
USP17L11C9JVI0 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP17L11C9JVI0 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
USP17L11C9JVI0 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP17L11C9JVI0 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP17L11C9JVI0 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC20.02■□□□□ 0.8
USP17L11C9JVI0 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP17L11C9JVI0 FAM185BP-201ENST00000443595 716 ntBASIC20.02■□□□□ 0.8
USP17L11C9JVI0 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC20.02■□□□□ 0.8
USP17L11C9JVI0 LINC02084-201ENST00000606069 1096 ntBASIC20.02■□□□□ 0.8
USP17L11C9JVI0 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC20.02■□□□□ 0.8
USP17L11C9JVI0 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
USP17L11C9JVI0 CITED2-204ENST00000618718 901 ntTSL 2 BASIC20.02■□□□□ 0.8
USP17L11C9JVI0 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC20.02■□□□□ 0.8
USP17L11C9JVI0 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC20.02■□□□□ 0.8
USP17L11C9JVI0 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC20.02■□□□□ 0.8
USP17L11C9JVI0 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC20.02■□□□□ 0.8
USP17L11C9JVI0 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP17L11C9JVI0 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP17L11C9JVI0 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
USP17L11C9JVI0 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP17L11C9JVI0 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC20.02■□□□□ 0.8
USP17L11C9JVI0 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.79
USP17L11C9JVI0 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC20.02■□□□□ 0.79
USP17L11C9JVI0 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC20.02■□□□□ 0.79
USP17L11C9JVI0 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
USP17L11C9JVI0 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
USP17L11C9JVI0 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
USP17L11C9JVI0 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC20.02■□□□□ 0.79
USP17L11C9JVI0 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
USP17L11C9JVI0 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC20.02■□□□□ 0.79
USP17L11C9JVI0 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
USP17L11C9JVI0 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
USP17L11C9JVI0 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
USP17L11C9JVI0 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP17L11C9JVI0 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
USP17L11C9JVI0 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
USP17L11C9JVI0 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms