Protein–RNA interactions for Protein: A4D1U4

LCHN, Protein LCHN, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCHNA4D1U4 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LCHNA4D1U4 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
LCHNA4D1U4 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.48■□□□□ 0.55
LCHNA4D1U4 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LCHNA4D1U4 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
LCHNA4D1U4 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LCHNA4D1U4 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LCHNA4D1U4 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC18.48■□□□□ 0.55
LCHNA4D1U4 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LCHNA4D1U4 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LCHNA4D1U4 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LCHNA4D1U4 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LCHNA4D1U4 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LCHNA4D1U4 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
LCHNA4D1U4 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
LCHNA4D1U4 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LCHNA4D1U4 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LCHNA4D1U4 RPL30-202ENST00000396070 440 ntTSL 2 BASIC18.48■□□□□ 0.55
LCHNA4D1U4 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
LCHNA4D1U4 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC18.48■□□□□ 0.55
LCHNA4D1U4 WRB-204ENST00000398753 699 ntTSL 3 BASIC18.48■□□□□ 0.55
LCHNA4D1U4 TREML5P-201ENST00000421694 576 ntBASIC18.48■□□□□ 0.55
LCHNA4D1U4 AC107890.1-201ENST00000422478 521 ntBASIC18.48■□□□□ 0.55
LCHNA4D1U4 GAPDHP21-201ENST00000450301 1010 ntBASIC18.48■□□□□ 0.55
LCHNA4D1U4 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC18.48■□□□□ 0.55
LCHNA4D1U4 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC18.48■□□□□ 0.55
LCHNA4D1U4 AC125807.1-201ENST00000483097 614 ntBASIC18.48■□□□□ 0.55
LCHNA4D1U4 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
LCHNA4D1U4 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LCHNA4D1U4 AL135744.1-201ENST00000565098 629 ntBASIC18.48■□□□□ 0.55
LCHNA4D1U4 LINC02560-201ENST00000596379 459 ntBASIC18.48■□□□□ 0.55
LCHNA4D1U4 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC18.48■□□□□ 0.55
LCHNA4D1U4 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.48■□□□□ 0.55
LCHNA4D1U4 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.48■□□□□ 0.55
LCHNA4D1U4 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LCHNA4D1U4 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LCHNA4D1U4 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.48■□□□□ 0.55
LCHNA4D1U4 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.48■□□□□ 0.55
LCHNA4D1U4 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.48■□□□□ 0.55
LCHNA4D1U4 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
LCHNA4D1U4 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LCHNA4D1U4 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.47■□□□□ 0.55
LCHNA4D1U4 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.47■□□□□ 0.55
LCHNA4D1U4 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.47■□□□□ 0.55
LCHNA4D1U4 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
LCHNA4D1U4 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LCHNA4D1U4 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
LCHNA4D1U4 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
LCHNA4D1U4 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
LCHNA4D1U4 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LCHNA4D1U4 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LCHNA4D1U4 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LCHNA4D1U4 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.47■□□□□ 0.55
LCHNA4D1U4 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LCHNA4D1U4 BAD-202ENST00000394531 631 ntTSL 3 BASIC18.47■□□□□ 0.55
LCHNA4D1U4 RBPMS2P1-201ENST00000437762 623 ntBASIC18.47■□□□□ 0.55
LCHNA4D1U4 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC18.47■□□□□ 0.55
LCHNA4D1U4 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
LCHNA4D1U4 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LCHNA4D1U4 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC18.47■□□□□ 0.55
LCHNA4D1U4 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.47■□□□□ 0.55
LCHNA4D1U4 SLC25A39P2-201ENST00000537614 270 ntBASIC18.47■□□□□ 0.55
LCHNA4D1U4 DUX4L17-201ENST00000557360 1267 ntBASIC18.47■□□□□ 0.55
LCHNA4D1U4 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC18.47■□□□□ 0.55
LCHNA4D1U4 AL390754.1-201ENST00000619088 582 ntBASIC18.47■□□□□ 0.55
LCHNA4D1U4 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LCHNA4D1U4 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.47■□□□□ 0.55
LCHNA4D1U4 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
LCHNA4D1U4 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
LCHNA4D1U4 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LCHNA4D1U4 AC135050.7-201ENST00000624508 2218 ntBASIC18.47■□□□□ 0.55
LCHNA4D1U4 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
LCHNA4D1U4 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
LCHNA4D1U4 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.47■□□□□ 0.55
LCHNA4D1U4 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LCHNA4D1U4 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.47■□□□□ 0.55
LCHNA4D1U4 AL135999.2-201ENST00000622438 1686 ntBASIC18.47■□□□□ 0.55
LCHNA4D1U4 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.47■□□□□ 0.55
LCHNA4D1U4 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LCHNA4D1U4 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LCHNA4D1U4 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LCHNA4D1U4 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.46■□□□□ 0.55
LCHNA4D1U4 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LCHNA4D1U4 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.46■□□□□ 0.55
LCHNA4D1U4 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LCHNA4D1U4 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LCHNA4D1U4 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LCHNA4D1U4 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LCHNA4D1U4 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.46■□□□□ 0.55
LCHNA4D1U4 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.46■□□□□ 0.55
LCHNA4D1U4 RN7SL589P-201ENST00000481268 310 ntBASIC18.46■□□□□ 0.55
LCHNA4D1U4 AP005018.1-201ENST00000525475 301 ntBASIC18.46■□□□□ 0.55
LCHNA4D1U4 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LCHNA4D1U4 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LCHNA4D1U4 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC18.46■□□□□ 0.55
LCHNA4D1U4 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC18.46■□□□□ 0.55
LCHNA4D1U4 AC008761.3-201ENST00000624803 892 ntBASIC18.46■□□□□ 0.55
LCHNA4D1U4 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LCHNA4D1U4 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.46■□□□□ 0.55
LCHNA4D1U4 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms