Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC13.51□□□□□ -0.25
TRAV5A0A0B4J249 KRT17P2-201ENST00000300992 1314 ntBASIC13.51□□□□□ -0.25
TRAV5A0A0B4J249 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV5A0A0B4J249 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV5A0A0B4J249 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV5A0A0B4J249 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV5A0A0B4J249 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV5A0A0B4J249 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV5A0A0B4J249 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC13.51□□□□□ -0.25
TRAV5A0A0B4J249 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
TRAV5A0A0B4J249 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV5A0A0B4J249 ECEL1P3-201ENST00000427961 737 ntBASIC13.51□□□□□ -0.25
TRAV5A0A0B4J249 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC13.51□□□□□ -0.25
TRAV5A0A0B4J249 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV5A0A0B4J249 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC13.51□□□□□ -0.25
TRAV5A0A0B4J249 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV5A0A0B4J249 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC13.51□□□□□ -0.25
TRAV5A0A0B4J249 TEN1-204ENST00000588202 862 ntTSL 3 BASIC13.51□□□□□ -0.25
TRAV5A0A0B4J249 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
TRAV5A0A0B4J249 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV5A0A0B4J249 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC13.51□□□□□ -0.25
TRAV5A0A0B4J249 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV5A0A0B4J249 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV5A0A0B4J249 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
TRAV5A0A0B4J249 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV5A0A0B4J249 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV5A0A0B4J249 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV5A0A0B4J249 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV5A0A0B4J249 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV5A0A0B4J249 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV5A0A0B4J249 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV5A0A0B4J249 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV5A0A0B4J249 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV5A0A0B4J249 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC13.51□□□□□ -0.25
TRAV5A0A0B4J249 AC092068.3-201ENST00000587894 2016 ntBASIC13.51□□□□□ -0.25
TRAV5A0A0B4J249 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV5A0A0B4J249 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV5A0A0B4J249 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV5A0A0B4J249 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV5A0A0B4J249 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV5A0A0B4J249 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
TRAV5A0A0B4J249 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV5A0A0B4J249 AGK-211ENST00000629555 2765 ntTSL 5 BASIC13.5□□□□□ -0.25
TRAV5A0A0B4J249 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV5A0A0B4J249 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
TRAV5A0A0B4J249 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV5A0A0B4J249 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC13.5□□□□□ -0.25
TRAV5A0A0B4J249 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC13.5□□□□□ -0.25
TRAV5A0A0B4J249 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
TRAV5A0A0B4J249 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV5A0A0B4J249 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
TRAV5A0A0B4J249 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC13.5□□□□□ -0.25
TRAV5A0A0B4J249 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV5A0A0B4J249 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC13.5□□□□□ -0.25
TRAV5A0A0B4J249 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
TRAV5A0A0B4J249 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV5A0A0B4J249 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV5A0A0B4J249 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
TRAV5A0A0B4J249 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV5A0A0B4J249 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV5A0A0B4J249 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV5A0A0B4J249 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV5A0A0B4J249 CRAT-202ENST00000393384 973 ntTSL 2 BASIC13.5□□□□□ -0.25
TRAV5A0A0B4J249 AP000523.1-201ENST00000398242 1049 ntBASIC13.5□□□□□ -0.25
TRAV5A0A0B4J249 KRT18P48-201ENST00000434763 852 ntBASIC13.5□□□□□ -0.25
TRAV5A0A0B4J249 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC13.5□□□□□ -0.25
TRAV5A0A0B4J249 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC13.5□□□□□ -0.25
TRAV5A0A0B4J249 AC034232.1-201ENST00000506026 1064 ntBASIC13.5□□□□□ -0.25
TRAV5A0A0B4J249 CD81-212ENST00000526072 1172 ntTSL 5 BASIC13.5□□□□□ -0.25
TRAV5A0A0B4J249 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC13.5□□□□□ -0.25
TRAV5A0A0B4J249 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV5A0A0B4J249 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV5A0A0B4J249 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC13.5□□□□□ -0.25
TRAV5A0A0B4J249 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC13.5□□□□□ -0.25
TRAV5A0A0B4J249 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC13.5□□□□□ -0.25
TRAV5A0A0B4J249 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC13.5□□□□□ -0.25
TRAV5A0A0B4J249 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV5A0A0B4J249 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC13.5□□□□□ -0.25
TRAV5A0A0B4J249 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
TRAV5A0A0B4J249 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV5A0A0B4J249 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV5A0A0B4J249 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV5A0A0B4J249 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
TRAV5A0A0B4J249 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC13.5□□□□□ -0.25
TRAV5A0A0B4J249 AL662844.4-201ENST00000606367 2838 ntBASIC13.5□□□□□ -0.25
TRAV5A0A0B4J249 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV5A0A0B4J249 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV5A0A0B4J249 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC13.5□□□□□ -0.25
TRAV5A0A0B4J249 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV5A0A0B4J249 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV5A0A0B4J249 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC13.5□□□□□ -0.25
TRAV5A0A0B4J249 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
TRAV5A0A0B4J249 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV5A0A0B4J249 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
TRAV5A0A0B4J249 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC13.5□□□□□ -0.25
TRAV5A0A0B4J249 PC-208ENST00000529047 1607 ntTSL 3 BASIC13.5□□□□□ -0.25
TRAV5A0A0B4J249 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
TRAV5A0A0B4J249 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC13.49□□□□□ -0.25
TRAV5A0A0B4J249 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV5A0A0B4J249 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms