Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC187A0A096LP49 SPDYE9P-201ENST00000570642 692 ntBASIC16.35■□□□□ 0.21
CCDC187A0A096LP49 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CCDC187A0A096LP49 SPDYE10P-202ENST00000612005 668 ntBASIC16.35■□□□□ 0.21
CCDC187A0A096LP49 SPDYE8P-202ENST00000612377 668 ntBASIC16.35■□□□□ 0.21
CCDC187A0A096LP49 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.35■□□□□ 0.21
CCDC187A0A096LP49 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.35■□□□□ 0.21
CCDC187A0A096LP49 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.35■□□□□ 0.21
CCDC187A0A096LP49 AL645728.2-201ENST00000641974 660 ntBASIC16.35■□□□□ 0.21
CCDC187A0A096LP49 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC187A0A096LP49 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
CCDC187A0A096LP49 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC187A0A096LP49 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC187A0A096LP49 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC187A0A096LP49 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC187A0A096LP49 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.35■□□□□ 0.21
CCDC187A0A096LP49 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC187A0A096LP49 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.35■□□□□ 0.21
CCDC187A0A096LP49 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CCDC187A0A096LP49 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC187A0A096LP49 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC187A0A096LP49 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC187A0A096LP49 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CCDC187A0A096LP49 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC187A0A096LP49 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC187A0A096LP49 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CCDC187A0A096LP49 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.35■□□□□ 0.21
CCDC187A0A096LP49 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC187A0A096LP49 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
CCDC187A0A096LP49 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC187A0A096LP49 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC187A0A096LP49 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CCDC187A0A096LP49 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC187A0A096LP49 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC187A0A096LP49 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC187A0A096LP49 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC187A0A096LP49 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.34■□□□□ 0.21
CCDC187A0A096LP49 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC187A0A096LP49 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
CCDC187A0A096LP49 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC187A0A096LP49 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC187A0A096LP49 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC187A0A096LP49 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.34■□□□□ 0.21
CCDC187A0A096LP49 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC187A0A096LP49 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC187A0A096LP49 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC187A0A096LP49 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC187A0A096LP49 AC005237.2-201ENST00000434368 219 ntBASIC16.34■□□□□ 0.21
CCDC187A0A096LP49 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.34■□□□□ 0.21
CCDC187A0A096LP49 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.34■□□□□ 0.21
CCDC187A0A096LP49 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC16.34■□□□□ 0.21
CCDC187A0A096LP49 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.34■□□□□ 0.21
CCDC187A0A096LP49 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.34■□□□□ 0.21
CCDC187A0A096LP49 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC187A0A096LP49 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC187A0A096LP49 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC187A0A096LP49 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.34■□□□□ 0.21
CCDC187A0A096LP49 AC015911.4-201ENST00000588022 1070 ntBASIC16.34■□□□□ 0.21
CCDC187A0A096LP49 AC005498.2-205ENST00000593218 784 ntBASIC16.34■□□□□ 0.21
CCDC187A0A096LP49 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.34■□□□□ 0.21
CCDC187A0A096LP49 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.34■□□□□ 0.21
CCDC187A0A096LP49 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.34■□□□□ 0.21
CCDC187A0A096LP49 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC187A0A096LP49 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.34■□□□□ 0.21
CCDC187A0A096LP49 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC187A0A096LP49 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CCDC187A0A096LP49 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CCDC187A0A096LP49 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.34■□□□□ 0.21
CCDC187A0A096LP49 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC187A0A096LP49 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC187A0A096LP49 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CCDC187A0A096LP49 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
CCDC187A0A096LP49 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC187A0A096LP49 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC187A0A096LP49 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.34■□□□□ 0.21
CCDC187A0A096LP49 AC104581.1-202ENST00000635932 2618 ntBASIC16.33■□□□□ 0.21
CCDC187A0A096LP49 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCDC187A0A096LP49 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCDC187A0A096LP49 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.33■□□□□ 0.21
CCDC187A0A096LP49 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.33■□□□□ 0.21
CCDC187A0A096LP49 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCDC187A0A096LP49 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC187A0A096LP49 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC187A0A096LP49 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.33■□□□□ 0.2
CCDC187A0A096LP49 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.2
CCDC187A0A096LP49 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC187A0A096LP49 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC187A0A096LP49 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.33■□□□□ 0.2
CCDC187A0A096LP49 AC140658.5-201ENST00000438532 169 ntBASIC16.33■□□□□ 0.2
CCDC187A0A096LP49 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.33■□□□□ 0.2
CCDC187A0A096LP49 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.33■□□□□ 0.2
CCDC187A0A096LP49 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CCDC187A0A096LP49 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.33■□□□□ 0.2
CCDC187A0A096LP49 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.33■□□□□ 0.2
CCDC187A0A096LP49 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC187A0A096LP49 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC187A0A096LP49 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC187A0A096LP49 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC187A0A096LP49 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC187A0A096LP49 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms