Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
PCDHGA6Q9Y5G7 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGA6Q9Y5G7 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGA6Q9Y5G7 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGA6Q9Y5G7 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.75■□□□□ 0.27
PCDHGA6Q9Y5G7 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGA6Q9Y5G7 AC025062.2-201ENST00000605477 670 ntBASIC16.75■□□□□ 0.27
PCDHGA6Q9Y5G7 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGA6Q9Y5G7 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.75■□□□□ 0.27
PCDHGA6Q9Y5G7 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGA6Q9Y5G7 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGA6Q9Y5G7 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGA6Q9Y5G7 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.75■□□□□ 0.27
PCDHGA6Q9Y5G7 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGA6Q9Y5G7 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGA6Q9Y5G7 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGA6Q9Y5G7 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGA6Q9Y5G7 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGA6Q9Y5G7 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA6Q9Y5G7 TNRC18P3-201ENST00000441896 2691 ntBASIC16.74■□□□□ 0.27
PCDHGA6Q9Y5G7 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
PCDHGA6Q9Y5G7 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA6Q9Y5G7 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA6Q9Y5G7 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
PCDHGA6Q9Y5G7 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA6Q9Y5G7 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA6Q9Y5G7 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.74■□□□□ 0.27
PCDHGA6Q9Y5G7 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA6Q9Y5G7 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA6Q9Y5G7 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA6Q9Y5G7 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA6Q9Y5G7 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.74■□□□□ 0.27
PCDHGA6Q9Y5G7 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.74■□□□□ 0.27
PCDHGA6Q9Y5G7 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA6Q9Y5G7 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.74■□□□□ 0.27
PCDHGA6Q9Y5G7 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA6Q9Y5G7 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.74■□□□□ 0.27
PCDHGA6Q9Y5G7 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
PCDHGA6Q9Y5G7 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA6Q9Y5G7 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.74■□□□□ 0.27
PCDHGA6Q9Y5G7 AC008735.5-201ENST00000623544 497 ntBASIC16.74■□□□□ 0.27
PCDHGA6Q9Y5G7 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA6Q9Y5G7 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA6Q9Y5G7 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA6Q9Y5G7 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA6Q9Y5G7 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA6Q9Y5G7 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.74■□□□□ 0.27
PCDHGA6Q9Y5G7 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.74■□□□□ 0.27
PCDHGA6Q9Y5G7 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA6Q9Y5G7 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA6Q9Y5G7 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
PCDHGA6Q9Y5G7 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA6Q9Y5G7 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA6Q9Y5G7 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.74■□□□□ 0.27
PCDHGA6Q9Y5G7 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.74■□□□□ 0.27
PCDHGA6Q9Y5G7 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA6Q9Y5G7 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA6Q9Y5G7 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
PCDHGA6Q9Y5G7 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA6Q9Y5G7 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA6Q9Y5G7 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA6Q9Y5G7 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA6Q9Y5G7 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA6Q9Y5G7 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA6Q9Y5G7 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA6Q9Y5G7 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
PCDHGA6Q9Y5G7 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
PCDHGA6Q9Y5G7 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA6Q9Y5G7 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA6Q9Y5G7 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA6Q9Y5G7 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
PCDHGA6Q9Y5G7 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.73■□□□□ 0.27
PCDHGA6Q9Y5G7 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA6Q9Y5G7 BX842568.4-201ENST00000421222 227 ntBASIC16.73■□□□□ 0.27
PCDHGA6Q9Y5G7 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.73■□□□□ 0.27
PCDHGA6Q9Y5G7 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
PCDHGA6Q9Y5G7 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
PCDHGA6Q9Y5G7 AC092865.5-201ENST00000545435 363 ntBASIC16.73■□□□□ 0.27
PCDHGA6Q9Y5G7 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDHGA6Q9Y5G7 FAM197Y3-203ENST00000618346 717 ntBASIC16.73■□□□□ 0.27
PCDHGA6Q9Y5G7 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDHGA6Q9Y5G7 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.73■□□□□ 0.27
PCDHGA6Q9Y5G7 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
PCDHGA6Q9Y5G7 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA6Q9Y5G7 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDHGA6Q9Y5G7 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA6Q9Y5G7 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA6Q9Y5G7 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA6Q9Y5G7 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA6Q9Y5G7 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA6Q9Y5G7 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.73■□□□□ 0.27
PCDHGA6Q9Y5G7 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA6Q9Y5G7 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
PCDHGA6Q9Y5G7 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
PCDHGA6Q9Y5G7 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA6Q9Y5G7 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA6Q9Y5G7 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.72■□□□□ 0.27
PCDHGA6Q9Y5G7 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.72■□□□□ 0.27
PCDHGA6Q9Y5G7 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
PCDHGA6Q9Y5G7 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms