Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGC4Q9Y5F7 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGC4Q9Y5F7 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGC4Q9Y5F7 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGC4Q9Y5F7 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
PCDHGC4Q9Y5F7 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGC4Q9Y5F7 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGC4Q9Y5F7 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHGC4Q9Y5F7 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDHGC4Q9Y5F7 OR7E14P-202ENST00000530490 1290 ntBASIC17.51■□□□□ 0.39
PCDHGC4Q9Y5F7 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.51■□□□□ 0.39
PCDHGC4Q9Y5F7 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGC4Q9Y5F7 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.51■□□□□ 0.39
PCDHGC4Q9Y5F7 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGC4Q9Y5F7 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGC4Q9Y5F7 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
PCDHGC4Q9Y5F7 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGC4Q9Y5F7 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.51■□□□□ 0.39
PCDHGC4Q9Y5F7 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PCDHGC4Q9Y5F7 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
PCDHGC4Q9Y5F7 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHGC4Q9Y5F7 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHGC4Q9Y5F7 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
PCDHGC4Q9Y5F7 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGC4Q9Y5F7 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDHGC4Q9Y5F7 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGC4Q9Y5F7 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGC4Q9Y5F7 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
PCDHGC4Q9Y5F7 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGC4Q9Y5F7 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGC4Q9Y5F7 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGC4Q9Y5F7 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
PCDHGC4Q9Y5F7 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGC4Q9Y5F7 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHGC4Q9Y5F7 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGC4Q9Y5F7 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDHGC4Q9Y5F7 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGC4Q9Y5F7 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGC4Q9Y5F7 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGC4Q9Y5F7 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDHGC4Q9Y5F7 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGC4Q9Y5F7 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.5■□□□□ 0.39
PCDHGC4Q9Y5F7 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGC4Q9Y5F7 LINC00982-205ENST00000420957 435 ntBASIC17.5■□□□□ 0.39
PCDHGC4Q9Y5F7 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGC4Q9Y5F7 FDX1P1-201ENST00000449115 551 ntBASIC17.5■□□□□ 0.39
PCDHGC4Q9Y5F7 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.5■□□□□ 0.39
PCDHGC4Q9Y5F7 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGC4Q9Y5F7 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.5■□□□□ 0.39
PCDHGC4Q9Y5F7 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHGC4Q9Y5F7 AL773604.1-201ENST00000617417 272 ntBASIC17.5■□□□□ 0.39
PCDHGC4Q9Y5F7 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHGC4Q9Y5F7 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.5■□□□□ 0.39
PCDHGC4Q9Y5F7 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGC4Q9Y5F7 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHGC4Q9Y5F7 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGC4Q9Y5F7 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDHGC4Q9Y5F7 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGC4Q9Y5F7 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGC4Q9Y5F7 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGC4Q9Y5F7 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGC4Q9Y5F7 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
PCDHGC4Q9Y5F7 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PCDHGC4Q9Y5F7 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGC4Q9Y5F7 AC016396.2-201ENST00000562575 1417 ntBASIC17.49■□□□□ 0.39
PCDHGC4Q9Y5F7 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGC4Q9Y5F7 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGC4Q9Y5F7 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGC4Q9Y5F7 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGC4Q9Y5F7 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
PCDHGC4Q9Y5F7 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGC4Q9Y5F7 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGC4Q9Y5F7 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGC4Q9Y5F7 AL031284.1-201ENST00000419297 478 ntBASIC17.49■□□□□ 0.39
PCDHGC4Q9Y5F7 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.49■□□□□ 0.39
PCDHGC4Q9Y5F7 AL049840.3-201ENST00000602669 611 ntBASIC17.49■□□□□ 0.39
PCDHGC4Q9Y5F7 AL589182.2-201ENST00000619332 1049 ntBASIC17.49■□□□□ 0.39
PCDHGC4Q9Y5F7 AC107918.4-202ENST00000641623 219 ntBASIC17.49■□□□□ 0.39
PCDHGC4Q9Y5F7 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGC4Q9Y5F7 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
PCDHGC4Q9Y5F7 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGC4Q9Y5F7 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGC4Q9Y5F7 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGC4Q9Y5F7 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGC4Q9Y5F7 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGC4Q9Y5F7 LETM1P2-201ENST00000597330 2178 ntBASIC17.49■□□□□ 0.39
PCDHGC4Q9Y5F7 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
PCDHGC4Q9Y5F7 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGC4Q9Y5F7 HLA-A-201ENST00000376802 1334 ntBASIC17.48■□□□□ 0.39
PCDHGC4Q9Y5F7 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
PCDHGC4Q9Y5F7 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHGC4Q9Y5F7 NCF1C-201ENST00000438382 1427 ntBASIC17.48■□□□□ 0.39
PCDHGC4Q9Y5F7 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGC4Q9Y5F7 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGC4Q9Y5F7 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGC4Q9Y5F7 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGC4Q9Y5F7 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGC4Q9Y5F7 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.48■□□□□ 0.39
PCDHGC4Q9Y5F7 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGC4Q9Y5F7 RNA5SP419-201ENST00000515908 135 ntBASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms