Protein–RNA interactions for Protein: Q9Y261

FOXA2, Hepatocyte nuclear factor 3-beta, humanhuman

Predicted RBP Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2Q9Y261 COX5BP2-201ENST00000392354 334 ntBASIC14.05□□□□□ -0.16
FOXA2Q9Y261 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
FOXA2Q9Y261 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
FOXA2Q9Y261 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC14.05□□□□□ -0.16
FOXA2Q9Y261 AC246785.2-201ENST00000432512 513 ntBASIC14.05□□□□□ -0.16
FOXA2Q9Y261 ATP5G2P1-201ENST00000433580 426 ntBASIC14.05□□□□□ -0.16
FOXA2Q9Y261 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC14.05□□□□□ -0.16
FOXA2Q9Y261 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC14.05□□□□□ -0.16
FOXA2Q9Y261 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC14.05□□□□□ -0.16
FOXA2Q9Y261 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC14.05□□□□□ -0.16
FOXA2Q9Y261 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
FOXA2Q9Y261 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC14.05□□□□□ -0.16
FOXA2Q9Y261 IL11-204ENST00000590625 1028 ntTSL 2 BASIC14.05□□□□□ -0.16
FOXA2Q9Y261 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
FOXA2Q9Y261 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
FOXA2Q9Y261 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC14.05□□□□□ -0.16
FOXA2Q9Y261 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
FOXA2Q9Y261 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
FOXA2Q9Y261 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC14.05□□□□□ -0.16
FOXA2Q9Y261 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
FOXA2Q9Y261 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
FOXA2Q9Y261 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
FOXA2Q9Y261 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC14.05□□□□□ -0.16
FOXA2Q9Y261 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
FOXA2Q9Y261 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
FOXA2Q9Y261 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
FOXA2Q9Y261 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
FOXA2Q9Y261 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
FOXA2Q9Y261 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
FOXA2Q9Y261 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
FOXA2Q9Y261 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC14.05□□□□□ -0.16
FOXA2Q9Y261 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
FOXA2Q9Y261 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
FOXA2Q9Y261 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
FOXA2Q9Y261 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXA2Q9Y261 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
FOXA2Q9Y261 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXA2Q9Y261 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
FOXA2Q9Y261 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
FOXA2Q9Y261 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXA2Q9Y261 AC106886.4-201ENST00000623557 2502 ntBASIC14.04□□□□□ -0.16
FOXA2Q9Y261 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC14.04□□□□□ -0.16
FOXA2Q9Y261 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXA2Q9Y261 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXA2Q9Y261 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXA2Q9Y261 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXA2Q9Y261 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
FOXA2Q9Y261 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXA2Q9Y261 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
FOXA2Q9Y261 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXA2Q9Y261 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
FOXA2Q9Y261 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXA2Q9Y261 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC14.04□□□□□ -0.16
FOXA2Q9Y261 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXA2Q9Y261 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC14.04□□□□□ -0.16
FOXA2Q9Y261 DRAXINP1-201ENST00000437611 948 ntBASIC14.04□□□□□ -0.16
FOXA2Q9Y261 AP002383.4-201ENST00000442518 975 ntBASIC14.04□□□□□ -0.16
FOXA2Q9Y261 LINC00265-3P-201ENST00000447588 903 ntBASIC14.04□□□□□ -0.16
FOXA2Q9Y261 CIB2-208ENST00000560618 804 ntTSL 2 BASIC14.04□□□□□ -0.16
FOXA2Q9Y261 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC14.04□□□□□ -0.16
FOXA2Q9Y261 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC14.04□□□□□ -0.16
FOXA2Q9Y261 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC14.04□□□□□ -0.16
FOXA2Q9Y261 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
FOXA2Q9Y261 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC14.04□□□□□ -0.16
FOXA2Q9Y261 Z69720.1-201ENST00000601483 472 ntBASIC14.04□□□□□ -0.16
FOXA2Q9Y261 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC14.04□□□□□ -0.16
FOXA2Q9Y261 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXA2Q9Y261 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXA2Q9Y261 AL118508.1-201ENST00000613502 2345 ntBASIC14.04□□□□□ -0.16
FOXA2Q9Y261 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC14.04□□□□□ -0.16
FOXA2Q9Y261 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
FOXA2Q9Y261 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXA2Q9Y261 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXA2Q9Y261 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXA2Q9Y261 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
FOXA2Q9Y261 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXA2Q9Y261 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
FOXA2Q9Y261 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXA2Q9Y261 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXA2Q9Y261 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXA2Q9Y261 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC14.04□□□□□ -0.16
FOXA2Q9Y261 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC14.04□□□□□ -0.16
FOXA2Q9Y261 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXA2Q9Y261 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXA2Q9Y261 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXA2Q9Y261 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
FOXA2Q9Y261 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC14.03□□□□□ -0.16
FOXA2Q9Y261 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXA2Q9Y261 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXA2Q9Y261 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.03□□□□□ -0.16
FOXA2Q9Y261 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXA2Q9Y261 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXA2Q9Y261 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXA2Q9Y261 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
FOXA2Q9Y261 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
FOXA2Q9Y261 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
FOXA2Q9Y261 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXA2Q9Y261 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC14.03□□□□□ -0.16
FOXA2Q9Y261 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC14.03□□□□□ -0.16
FOXA2Q9Y261 TOB2P1-201ENST00000469761 992 ntBASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms